RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.49
PXN-206ENST00000458477 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
PXN-206ENST00000458477 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
PXN-206ENST00000458477 RPN1P04843 607 aaKnown RBP11.96□□□□□ -0.49
PXN-206ENST00000458477 PDE4DQ08499 809 aa11.96□□□□□ -0.49
PXN-206ENST00000458477 NOC4LQ9BVI4 516 aaKnown RBP11.96□□□□□ -0.49
PXN-206ENST00000458477 FAM204AQ9H8W3 233 aa11.96□□□□□ -0.49
PXN-206ENST00000458477 BMP6P22004 513 aa11.96□□□□□ -0.5
PXN-206ENST00000458477 TOB1P50616 345 aaPredicted RBP11.96□□□□□ -0.5
PXN-206ENST00000458477 PPP2R5BQ15173 497 aa11.96□□□□□ -0.5
PXN-206ENST00000458477 LETM2Q2VYF4 491 aa11.96□□□□□ -0.5
PXN-206ENST00000458477 LUC7LQ9NQ29 371 aaKnown RBP11.96□□□□□ -0.5
PXN-206ENST00000458477 INTS13Q9NVM9 706 aa11.96□□□□□ -0.5
PXN-206ENST00000458477 SEC63Q9UGP8 760 aaKnown RBP11.96□□□□□ -0.5
PXN-206ENST00000458477 A0A1B0GTH6 734 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 CUL4BQ13620 913 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 NR1I3Q14994 352 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 ZNF579Q8NAF0 562 aaKnown RBP11.95□□□□□ -0.5
PXN-206ENST00000458477 CALML4Q96GE6 196 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 FAM107BQ9H098 131 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 SASH3O75995 380 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 TFRCP02786 760 aaKnown RBP11.95□□□□□ -0.5
PXN-206ENST00000458477 NAPAP54920 295 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 ARID5AQ03989 594 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 NTRK3Q16288 839 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 LRP10Q7Z4F1 713 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.95□□□□□ -0.5
PXN-206ENST00000458477 USP21Q9UK80 565 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 SETD1AO15047 1707 aaKnown RBP11.95□□□□□ -0.5
PXN-206ENST00000458477 G3V3G9 751 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
PXN-206ENST00000458477 TSPY3P0CV98 308 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 TSPY8P0CW00 308 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 SCG2P13521 617 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 VSNL1P62760 191 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 MICALL1Q8N3F8 863 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 FAM76AQ8TAV0 307 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 STAG1Q8WVM7 1258 aa11.95□□□□□ -0.5
PXN-206ENST00000458477 RRP15Q9Y3B9 282 aaKnown RBP11.95□□□□□ -0.5
PXN-206ENST00000458477 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 AMPD3Q01432 767 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 PPARDQ03181 441 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 CHRNDQ07001 517 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 CCDC40Q4G0X9 1142 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 SND1Q7KZF4 910 aaKnown RBP eCLIP11.94□□□□□ -0.55e-9■□□□□ 8.6
PXN-206ENST00000458477 HAUS4Q9H6D7 363 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 KCND1Q9NSA2 647 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 ABHD10Q9NUJ1 306 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 TFCP2L1Q9NZI6 479 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 RGPD8O14715 1765 aaPredicted RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 TRIM49BA6NDI0 452 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 GOLGA6L10A6NI86 522 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 B4DLN1 442 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 SRGAP2O75044 1071 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 NDUFA10O95299 355 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
PXN-206ENST00000458477 FBXL16Q8N461 479 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 FAM207AQ9NSI2 230 aaPredicted RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 ADD3Q9UEY8 706 aaKnown RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 CSF1RP07333 972 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 ALX1Q15699 326 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 INF2Q27J81 1249 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 TTC31Q49AM3 519 aaPredicted RBP11.94□□□□□ -0.5
PXN-206ENST00000458477 FUT8Q9BYC5 575 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
PXN-206ENST00000458477 GOLGA6CA6NDK9 693 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 H7C1D1 291 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
PXN-206ENST00000458477 GOLGA6DP0CG33 693 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 CYP27A1Q02318 531 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 ENAHQ8N8S7 591 aaPredicted RBP11.93□□□□□ -0.5
PXN-206ENST00000458477 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 TAF4BQ92750 862 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 SECISBP2LQ93073 1101 aaKnown RBP11.93□□□□□ -0.5
PXN-206ENST00000458477 GOLGA6AQ9NYA3 693 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 GOLGA6BA6NDN3 693 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 MYO1CO00159 1063 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 FOXP2O15409 715 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 ZEB2O60315 1214 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 RNF40O75150 1001 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 ZPR1O75312 459 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
PXN-206ENST00000458477 MRPS25P82663 173 aaKnown RBP11.93□□□□□ -0.5
PXN-206ENST00000458477 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 CHP1Q99653 195 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 BMP2KQ9NSY1 1161 aaPredicted RBP11.93□□□□□ -0.5
PXN-206ENST00000458477 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
PXN-206ENST00000458477 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 TRIM10Q9UDY6 481 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 A0A0U1RQJ8 604 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 BICDL2A1A5D9 508 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 HSF2BPO75031 334 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
PXN-206ENST00000458477 BLIDQ8IZY5 108 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms