RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 KCNH3Q9ULD8 1083 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 SRPRBQ9Y5M8 271 aaKnown RBP18.75■□□□□ 0.59
CAPN13-203ENST00000458085 PSME4Q14997 1843 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 GREB1LQ9C091 1923 aaPredicted RBP18.75■□□□□ 0.59
CAPN13-203ENST00000458085 IQCB1Q15051 598 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 LONRF3Q496Y0 759 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 HOMER1Q86YM7 354 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 RTKN2Q8IZC4 609 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 BLIDQ8IZY5 108 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 PSMD1Q99460 953 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 CSRNP2Q9H175 543 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 EHD4Q9H223 541 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 VAT1LQ9HCJ6 419 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 SH3GLB2Q9NR46 395 aa18.75■□□□□ 0.59
CAPN13-203ENST00000458085 KIF13BQ9NQT8 1826 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 MPHOSPH10O00566 681 aaKnown RBP18.74■□□□□ 0.59
CAPN13-203ENST00000458085 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 LZTS2Q9BRK4 669 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 BARHL2Q9NY43 387 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 PCDHA4Q9UN74 947 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 CEP131Q9UPN4 1083 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
CAPN13-203ENST00000458085 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 M0R2N6 131 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 BIN1O00499 593 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
CAPN13-203ENST00000458085 TIGD1Q96MW7 591 aa18.74■□□□□ 0.59
CAPN13-203ENST00000458085 NOL7Q9UMY1 257 aaKnown RBP18.74■□□□□ 0.59
CAPN13-203ENST00000458085 PSMD14O00487 310 aa18.73■□□□□ 0.59
CAPN13-203ENST00000458085 TTLL1O95922 423 aa18.73■□□□□ 0.59
CAPN13-203ENST00000458085 PIGSQ96S52 555 aa18.73■□□□□ 0.59
CAPN13-203ENST00000458085 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
CAPN13-203ENST00000458085 FOXN1O15353 648 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 CALML3P27482 149 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
CAPN13-203ENST00000458085 ANO10Q9NW15 660 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 MYH4Q9Y623 1939 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 SNHG28P0DPA3 235 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 PNOCQ13519 176 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 DPCR1Q3MIW9 517 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 RSBN1LQ6PCB5 846 aaPredicted RBP18.72■□□□□ 0.59
CAPN13-203ENST00000458085 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
CAPN13-203ENST00000458085 DHX36Q9H2U1 1008 aaKnown RBP18.72■□□□□ 0.59
CAPN13-203ENST00000458085 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.72■□□□□ 0.59
CAPN13-203ENST00000458085 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 PCDHA6Q9UN73 950 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 PCDHA8Q9Y5H6 950 aa18.72■□□□□ 0.59
CAPN13-203ENST00000458085 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 PTGDRQ13258 359 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 ISM2Q6H9L7 571 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 GPCPD1Q9NPB8 672 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 FOXP4Q8IVH2 680 aaPredicted RBP18.71■□□□□ 0.59
CAPN13-203ENST00000458085 DHX40Q8IX18 779 aaKnown RBP18.71■□□□□ 0.59
CAPN13-203ENST00000458085 EPSTI1Q96J88 318 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 GMLQ99445 158 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
CAPN13-203ENST00000458085 POLR2DO15514 142 aaKnown RBP18.7■□□□□ 0.58
CAPN13-203ENST00000458085 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
CAPN13-203ENST00000458085 MCM7P33993 719 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 HS1BP3Q53T59 392 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 PDILTQ8N807 584 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 CNNM3Q8NE01 707 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 RRP36Q96EU6 259 aaKnown RBP18.7■□□□□ 0.58
CAPN13-203ENST00000458085 MORC2Q9Y6X9 1032 aaPredicted RBP18.7■□□□□ 0.58
CAPN13-203ENST00000458085 A0A087X0B3 334 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
CAPN13-203ENST00000458085 CAVIN2O95810 425 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 ATP2C1P98194 919 aaPredicted RBP18.7■□□□□ 0.58
CAPN13-203ENST00000458085 TTBK2Q6IQ55 1244 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 DAGLBQ8NCG7 672 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 CCDC148Q8NFR7 591 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 FAM13BQ9NYF5 915 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 SERTAD1Q9UHV2 236 aa18.7■□□□□ 0.58
CAPN13-203ENST00000458085 SMARCA1P28370 1054 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 NAPAP54920 295 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 IL17AQ16552 155 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 CERKLQ49MI3 558 aaPredicted RBP18.69■□□□□ 0.58
CAPN13-203ENST00000458085 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 ZMYND12Q9H0C1 365 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 TUBE1Q9UJT0 475 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 UTRNP46939 3433 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 CLRN2A0PK11 232 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 GDF11O95390 407 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 PTMAP06454 111 aaKnown RBP18.69■□□□□ 0.58
CAPN13-203ENST00000458085 TRAPPC10P48553 1259 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 JAG1P78504 1218 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 MDM2Q00987 491 aaPredicted RBP18.69■□□□□ 0.58
CAPN13-203ENST00000458085 ZNF543Q08ER8 600 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 ASPRV1Q53RT3 343 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 TATDN1Q6P1N9 297 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 CCDC17Q96LX7 622 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
CAPN13-203ENST00000458085 VWA3AA6NCI4 1184 aa18.68■□□□□ 0.58
CAPN13-203ENST00000458085 SPDYE2BA6NHP3 402 aa18.68■□□□□ 0.58
CAPN13-203ENST00000458085 SPDYE6P0CI01 402 aa18.68■□□□□ 0.58
CAPN13-203ENST00000458085 RRP1BQ14684 758 aaKnown RBP18.68■□□□□ 0.58
CAPN13-203ENST00000458085 GRAMD1CQ8IYS0 662 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms