RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 GLT1D1Q96MS3 346 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 ABCF2Q9UG63 623 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.1■□□□□ 0.81
SF3B4-202ENST00000457312 ZBBXA8MT70 800 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 ARVCFO00192 962 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 KRT37O76014 449 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 ZNF865P0CJ78 1059 aaPredicted RBP20.1■□□□□ 0.81
SF3B4-202ENST00000457312 MECOMQ03112 1051 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 IER5LQ5T953 404 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 VWCEQ96DN2 955 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 FEZ1Q99689 392 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 SCN5AQ14524 2016 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 GVINP1Q7Z2Y8 2422 aa20.1■□□□□ 0.81
SF3B4-202ENST00000457312 A0A0U1RQG5 324 aaPredicted RBP20.09■□□□□ 0.81
SF3B4-202ENST00000457312 ZBTB22O15209 634 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 TLR3O15455 904 aaKnown RBP20.09■□□□□ 0.81
SF3B4-202ENST00000457312 MAP4K4O95819 1239 aaPredicted RBP20.09■□□□□ 0.81
SF3B4-202ENST00000457312 CD4P01730 458 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 PTCRAQ6ISU1 281 aaPredicted RBP20.09■□□□□ 0.81
SF3B4-202ENST00000457312 SPRED2Q7Z698 418 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 ABRAQ8N0Z2 381 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 SPATC1LQ9H0A9 340 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 HIPK3Q9H422 1215 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 PTPRSQ13332 1948 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 PARP14Q460N5 1801 aa20.09■□□□□ 0.81
SF3B4-202ENST00000457312 KCNA5P22460 613 aa20.08■□□□□ 0.81
SF3B4-202ENST00000457312 RASGRF1Q13972 1273 aa20.08■□□□□ 0.81
SF3B4-202ENST00000457312 METTL16Q86W50 562 aaKnown RBP20.08■□□□□ 0.81
SF3B4-202ENST00000457312 WNT8AQ9H1J5 351 aa20.08■□□□□ 0.81
SF3B4-202ENST00000457312 FAM86C1Q9NVL1 165 aa20.08■□□□□ 0.81
SF3B4-202ENST00000457312 ZNF536O15090 1300 aa20.07■□□□□ 0.8
SF3B4-202ENST00000457312 PDS5AQ29RF7 1337 aaKnown RBP20.07■□□□□ 0.8
SF3B4-202ENST00000457312 EYA2O00167 538 aa20.07■□□□□ 0.8
SF3B4-202ENST00000457312 CST5P28325 142 aaPredicted RBP20.07■□□□□ 0.8
SF3B4-202ENST00000457312 CCL23P55773 120 aa20.07■□□□□ 0.8
SF3B4-202ENST00000457312 IRX5P78411 483 aaPredicted RBP20.07■□□□□ 0.8
SF3B4-202ENST00000457312 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
SF3B4-202ENST00000457312 RPAP3Q9H6T3 665 aaPredicted RBP20.07■□□□□ 0.8
SF3B4-202ENST00000457312 COL11A1P12107 1806 aaPredicted RBP20.06■□□□□ 0.8
SF3B4-202ENST00000457312 GRXCR2A6NFK2 248 aa20.06■□□□□ 0.8
SF3B4-202ENST00000457312 USP14P54578 494 aa20.06■□□□□ 0.8
SF3B4-202ENST00000457312 TEX11Q8IYF3 940 aa20.06■□□□□ 0.8
SF3B4-202ENST00000457312 GDPD5Q8WTR4 605 aa20.06■□□□□ 0.8
SF3B4-202ENST00000457312 TINF2Q9BSI4 451 aa20.06■□□□□ 0.8
SF3B4-202ENST00000457312 DHX36Q9H2U1 1008 aaKnown RBP20.06■□□□□ 0.8
SF3B4-202ENST00000457312 NCOR2Q9Y618 2525 aa20.06■□□□□ 0.8
SF3B4-202ENST00000457312 GH2P01242 217 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 ASGR1P07306 291 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 ZP2Q05996 745 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 TTLL4Q14679 1199 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 SPTY2D1Q68D10 685 aaPredicted RBP20.05■□□□□ 0.8
SF3B4-202ENST00000457312 CDCA7LQ96GN5 454 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 SRCIN1Q9C0H9 1055 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 KIAA1683Q9H0B3 1180 aa20.05■□□□□ 0.8
SF3B4-202ENST00000457312 MCM3APO60318 1980 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 RALBP1Q15311 655 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 ATG9AQ7Z3C6 839 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 PRRX2Q99811 253 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 NOC4LQ9BVI4 516 aaKnown RBP20.04■□□□□ 0.8
SF3B4-202ENST00000457312 MROH8Q9H579 483 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 LMCD1Q9NZU5 365 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 PKD1L2Q7Z442 2459 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 SIP14410 1827 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 ZFHX4Q86UP3 3567 aa20.04■□□□□ 0.8
SF3B4-202ENST00000457312 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
SF3B4-202ENST00000457312 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
SF3B4-202ENST00000457312 CRACR2BQ8N4Y2 399 aaPredicted RBP20.03■□□□□ 0.8
SF3B4-202ENST00000457312 VTI1AQ96AJ9 217 aa20.03■□□□□ 0.8
SF3B4-202ENST00000457312 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
SF3B4-202ENST00000457312 DMDP11532 3685 aa20.03■□□□□ 0.8
SF3B4-202ENST00000457312 ADORA1P30542 326 aa20.02■□□□□ 0.8
SF3B4-202ENST00000457312 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.8
SF3B4-202ENST00000457312 ERICH6Q7L0X2 663 aa20.02■□□□□ 0.8
SF3B4-202ENST00000457312 RPUSD2Q8IZ73 545 aaKnown RBP20.02■□□□□ 0.8
SF3B4-202ENST00000457312 ACER1Q8TDN7 264 aa20.02■□□□□ 0.8
SF3B4-202ENST00000457312 SH3RF3Q8TEJ3 882 aaPredicted RBP20.02■□□□□ 0.8
SF3B4-202ENST00000457312 TRIM34Q9BYJ4 488 aa20.02■□□□□ 0.8
SF3B4-202ENST00000457312 MYH1P12882 1939 aa20.02■□□□□ 0.79
SF3B4-202ENST00000457312 COL4A6Q14031 1691 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 C19orf67A6NJJ6 358 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 PGK2P07205 417 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 FCER1AP12319 257 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 FOXP4Q8IVH2 680 aaPredicted RBP20.01■□□□□ 0.79
SF3B4-202ENST00000457312 PCSK9Q8NBP7 692 aaKnown RBP20.01■□□□□ 0.79
SF3B4-202ENST00000457312 NSUN4Q96CB9 384 aaKnown RBP20.01■□□□□ 0.79
SF3B4-202ENST00000457312 SCLYQ96I15 445 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 SLC9A7Q96T83 725 aa20.01■□□□□ 0.79
SF3B4-202ENST00000457312 C6orf222P0C671 652 aaPredicted RBP20■□□□□ 0.79
SF3B4-202ENST00000457312 ZNF792Q3KQV3 632 aa20■□□□□ 0.79
SF3B4-202ENST00000457312 PUS10Q3MIT2 529 aaKnown RBP20■□□□□ 0.79
SF3B4-202ENST00000457312 CNPY2Q9Y2B0 182 aa20■□□□□ 0.79
SF3B4-202ENST00000457312 TANC1Q9C0D5 1861 aa20■□□□□ 0.79
SF3B4-202ENST00000457312 TET1Q8NFU7 2136 aa20■□□□□ 0.79
SF3B4-202ENST00000457312 FLT1P17948 1338 aa20■□□□□ 0.79
SF3B4-202ENST00000457312 ADCY6O43306 1168 aa19.99■□□□□ 0.79
SF3B4-202ENST00000457312 DUSP11O75319 330 aaKnown RBP19.99■□□□□ 0.79
SF3B4-202ENST00000457312 PLS1Q14651 629 aa19.99■□□□□ 0.79
SF3B4-202ENST00000457312 COG2Q14746 738 aa19.99■□□□□ 0.79
SF3B4-202ENST00000457312 BMP8AQ7Z5Y6 402 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms