RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 RPAP3Q9H6T3 665 aaPredicted RBP16.49■□□□□ 0.23
LINC00887-204ENST00000456816 GPCPD1Q9NPB8 672 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 LIMCH1Q9UPQ0 1083 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 FAM155AB1AL88 458 aaPredicted RBP16.48■□□□□ 0.23
LINC00887-204ENST00000456816 PDHBP11177 359 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 MCM2P49736 904 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 NOGQ13253 232 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 RTN1Q16799 776 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 KIAA1755Q5JYT7 1200 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 RASGRP2Q7LDG7 609 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 C12orf42Q96LP6 360 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
LINC00887-204ENST00000456816 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
LINC00887-204ENST00000456816 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 GOLGA8HP0CJ92 632 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 TROAPQ12815 778 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 GRM4Q14833 912 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 HSCBQ8IWL3 235 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 ZNF274Q96GC6 653 aaPredicted RBP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 ZSCAN31Q96LW9 406 aaPredicted RBP16.47■□□□□ 0.23
LINC00887-204ENST00000456816 AGTPBP1Q9UPW5 1226 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
LINC00887-204ENST00000456816 WDR33Q9C0J8 1336 aaKnown RBP16.46■□□□□ 0.23
LINC00887-204ENST00000456816 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L15C9J2P7 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L13C9JLJ4 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 TMEM232C9JQI7 657 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L11C9JVI0 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L18D6R9N7 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L22D6RA61 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L17D6RBQ6 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L19D6RCP7 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L20D6RJB6 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 CPLX1O14810 134 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 AOC2O75106 756 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 FLOT1O75955 427 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
LINC00887-204ENST00000456816 RCAN1P53805 252 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
LINC00887-204ENST00000456816 ZNF543Q08ER8 600 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 USP17L24Q0WX57 530 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
LINC00887-204ENST00000456816 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
LINC00887-204ENST00000456816 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
LINC00887-204ENST00000456816 OSBPP22059 807 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
LINC00887-204ENST00000456816 VEGFBP49765 207 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 GNAQP50148 359 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 STAT2P52630 851 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 EVCP57679 992 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 CHURC1Q8WUH1 139 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
LINC00887-204ENST00000456816 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
LINC00887-204ENST00000456816 CTDP1Q9Y5B0 961 aaPredicted RBP16.45■□□□□ 0.22
LINC00887-204ENST00000456816 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 KLRF2D3W0D1 207 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 PDHXO00330 501 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 SLC16A2P36021 539 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 INHBEP58166 350 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 ME3Q16798 604 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
LINC00887-204ENST00000456816 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 FAM160B2Q86V87 743 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 STAG2Q8N3U4 1231 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 NECAB1Q8N987 351 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 NCOA5Q9HCD5 579 aaKnown RBP16.44■□□□□ 0.22
LINC00887-204ENST00000456816 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
LINC00887-204ENST00000456816 PFKFB2O60825 505 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 LARGE1O95461 756 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
LINC00887-204ENST00000456816 MOGSQ13724 837 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 TTBK2Q6IQ55 1244 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 LZTS2Q9BRK4 669 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 UBA5Q9GZZ9 404 aa16.43■□□□□ 0.22
LINC00887-204ENST00000456816 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
LINC00887-204ENST00000456816 PLEKHA8P1O95397 391 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 CDC27P30260 824 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms