RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 IDEP14735 1019 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 MATR3P43243 847 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 CYP27A1Q02318 531 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 CKAP4Q07065 602 aaKnown RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 PAK1Q13153 545 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 KCTD16Q68DU8 428 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 IRF2BP1Q8IU81 584 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 CNPY4Q8N129 248 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 SH2D3CQ8N5H7 860 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 TSEN2Q8NCE0 465 aaKnown RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 EEF2KMTQ96G04 330 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 RPGRIP1Q96KN7 1286 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 EPB41L4AQ9HCS5 686 aaPredicted RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 RWDD2AQ9UIY3 292 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 TBC1D2BQ9UPU7 963 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 LUC7L2Q9Y383 392 aaKnown RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 SLIT3O75094 1523 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 PRDM1O75626 825 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 DEXIO95424 95 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 CCDC172P0C7W6 258 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 ATP1A2P50993 1020 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 TRIM14Q14142 442 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 ZNF174Q15697 407 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 DNAJC7Q99615 494 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 AGPAT5Q9NUQ2 364 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 SMARCAL1Q9NZC9 954 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 GDAQ9Y2T3 454 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 KRT86O43790 486 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 ZEB2O60315 1214 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 FNTAP49354 379 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 PSMB7Q99436 277 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 BCL9LQ86UU0 1499 aa11.56□□□□□ -0.56
CLIP4-208ENST00000456385 H0YHG0 523 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 PDE6AP16499 860 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 KLK7P49862 253 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 TCIRG1Q13488 830 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 CREG2Q8IUH2 290 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 MB21D1Q8N884 522 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
CLIP4-208ENST00000456385 CD248Q9HCU0 757 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 GOLGA8KD6RF30 607 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 CYP27B1O15528 508 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 KRT14P02533 472 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 PARP1P09874 1014 aaKnown RBP11.55□□□□□ -0.56
CLIP4-208ENST00000456385 PRCPP42785 496 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 PMS1P54277 932 aaKnown RBP11.55□□□□□ -0.56
CLIP4-208ENST00000456385 SPAG1Q07617 926 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 GBP6Q6ZN66 633 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 IFNL3Q8IZI9 196 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 ORAI2Q96SN7 254 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 EHD2Q9NZN4 543 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 CEP83Q9Y592 693 aa11.55□□□□□ -0.56
CLIP4-208ENST00000456385 CXCR5P32302 372 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 USP8P40818 1118 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 WTAPQ15007 396 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 TSR1Q2NL82 804 aaKnown RBP11.54□□□□□ -0.56
CLIP4-208ENST00000456385 OTUD6BQ8N6M0 293 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 FANCBQ8NB91 859 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 FAM89AQ96GI7 184 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 CABS1Q96KC9 395 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 NAPBQ9H115 298 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 NHEJ1Q9H9Q4 299 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-208ENST00000456385 CAPN11Q9UMQ6 739 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 SUFUQ9UMX1 484 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 ARHGAP23Q9P227 1491 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 TCRBV5S4A2TA0A5A2 114 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 PRKAB2O43741 272 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 CABP4P57796 275 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 KRT83P78385 493 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 GUCY1A3Q02108 690 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 PTGDRQ13258 359 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 METTL24Q5JXM2 366 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 KRT26Q7Z3Y9 468 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 AMOTL1Q8IY63 956 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
CLIP4-208ENST00000456385 B4DLN1 442 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
CLIP4-208ENST00000456385 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
CLIP4-208ENST00000456385 TDO2P48775 406 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 APBA1Q02410 837 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 PPARDQ03181 441 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 UBE3CQ15386 1083 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 ZNF507Q8TCN5 953 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 ARMT1Q9H993 441 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 DONSONQ9NYP3 566 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
CLIP4-208ENST00000456385 CCDC196A0A1B0GTZ2 297 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms