RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 FANCGO15287 622 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 SLC8A3P57103 927 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
HDAC9-218ENST00000456174 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 TBC1D25Q3MII6 688 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 LARP1BQ659C4 914 aaKnown RBP8.62□□□□□ -1.03
HDAC9-218ENST00000456174 CDCA2Q69YH5 1023 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-218ENST00000456174 RCSD1Q6JBY9 416 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 TLDC1Q6P9B6 456 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 ZNF384Q8TF68 577 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 NSUN4Q96CB9 384 aaKnown RBP8.62□□□□□ -1.03
HDAC9-218ENST00000456174 THOC1Q96FV9 657 aaKnown RBP8.62□□□□□ -1.03
HDAC9-218ENST00000456174 ZNF274Q96GC6 653 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-218ENST00000456174 BRIP1Q9BX63 1249 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 DNAJC25Q9H1X3 360 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 EPC1Q9H2F5 836 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 L1RE1Q9UN81 338 aa8.62□□□□□ -1.03
HDAC9-218ENST00000456174 TIAM2Q8IVF5 1701 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 WDR19Q8NEZ3 1342 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 GOLGA6L19H0YKK7 550 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 URI1O94763 535 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-218ENST00000456174 FAM163BP0C2L3 166 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 PDCP20941 246 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 MAGEA8P43361 318 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 ANTXR2P58335 489 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 MECOMQ03112 1051 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 C15orf52Q6ZUT6 534 aaKnown RBP8.61□□□□□ -1.03
HDAC9-218ENST00000456174 ZNF804AQ7Z570 1209 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 CLIC6Q96NY7 704 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 GPR101Q96P66 508 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-218ENST00000456174 RIOK1Q9BRS2 568 aaKnown RBP8.61□□□□□ -1.03
HDAC9-218ENST00000456174 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-218ENST00000456174 GGA1Q9UJY5 639 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 MRFAP1Q9Y605 127 aa8.61□□□□□ -1.03
HDAC9-218ENST00000456174 COL11A2P13942 1736 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-218ENST00000456174 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 EBAG9O00559 213 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 N4BP1O75113 896 aaKnown RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 PPFIA2O75334 1257 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 UFL1O94874 794 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 MMP10P09238 476 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 ATP2B4P23634 1241 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 PDIA3P30101 505 aaKnown RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 DYNLL1P63167 89 aaKnown RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 CKAP2LQ8IYA6 745 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 MSANTD4Q8NCY6 345 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 MAGEC3Q8TD91 643 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 TMX4Q9H1E5 349 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 HOMER3Q9NSC5 361 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 MTMR6Q9Y217 621 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 JAG2Q9Y219 1238 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 NEDD4P46934 1319 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 B4E1Z4 1266 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 NRDCO43847 1150 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 JAK2O60674 1132 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 ERLIN1O75477 346 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 PRDX5P30044 214 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 HSP90B2PQ58FF3 399 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 SPTY2D1Q68D10 685 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 CYB5R4Q7L1T6 521 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 TMC4Q7Z404 712 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 TTC6Q86TZ1 520 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 FCHSD1Q86WN1 690 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 MAB21L3Q8N8X9 362 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 AFAP1L1Q8TED9 768 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 SDR42E1Q8WUS8 393 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 LLPHQ9BRT6 129 aaKnown RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 PLEKHA4Q9H4M7 779 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 SUDS3Q9H7L9 328 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-218ENST00000456174 FAM204AQ9H8W3 233 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 CD248Q9HCU0 757 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 INCENPQ9NQS7 918 aa8.6□□□□□ -1.03
HDAC9-218ENST00000456174 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 AP1G2O75843 785 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 SRGNP10124 158 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 PDE6BP35913 854 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 AARSP49588 968 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 RAB27AP51159 221 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CLNS1AP54105 237 aaKnown RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 EN1Q05925 392 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 EZH2Q15910 746 aaKnown RBP8.59□□□□□ -1.03
HDAC9-218ENST00000456174 CAMK4Q16566 473 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 AKNAD1Q5T1N1 836 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 ARMCX5Q6P1M9 558 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 MFSD6Q6ZSS7 791 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 TRIM74Q86UV6 250 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 TRIM73Q86UV7 250 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 SP8Q8IXZ3 490 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 SMARCC2Q8TAQ2 1214 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 NKX2-3Q8TAU0 364 aa8.59□□□□□ -1.03
HDAC9-218ENST00000456174 WDR66Q8TBY9 1149 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms