RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SLFN12Q8IYM2 578 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 TMEFF1Q8IYR6 380 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 MZB1Q8WU39 189 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 JARID2Q92833 1246 aaPredicted RBP4.46□□□□□ -1.7
LINC02540-201ENST00000455554 MAP6Q96JE9 813 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 RNF19AQ9NV58 838 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 ZMYM5Q9UJ78 669 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 ABLIM1O14639 778 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 LDHBP07195 334 aaKnown RBP4.45□□□□□ -1.7
LINC02540-201ENST00000455554 GNA15P30679 374 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 KIR2DL1P43626 348 aaPredicted RBP4.45□□□□□ -1.7
LINC02540-201ENST00000455554 KIR2DL2P43627 348 aaPredicted RBP4.45□□□□□ -1.7
LINC02540-201ENST00000455554 CDR1P51861 262 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 EFEMP1Q12805 493 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 ZXDCQ2QGD7 858 aaPredicted RBP4.45□□□□□ -1.7
LINC02540-201ENST00000455554 SPATS1Q496A3 300 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 CEP128Q6ZU80 1094 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 WAPLQ7Z5K2 1190 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 FAM129CQ86XR2 697 aa4.45□□□□□ -1.7
LINC02540-201ENST00000455554 ENOX1Q8TC92 643 aaKnown RBP4.45□□□□□ -1.7
LINC02540-201ENST00000455554 ASCC2Q9H1I8 757 aaPredicted RBP4.45□□□□□ -1.7
LINC02540-201ENST00000455554 P4HBP07237 508 aaKnown RBP4.44□□□□□ -1.7
LINC02540-201ENST00000455554 RLBP1P12271 317 aa4.44□□□□□ -1.7
LINC02540-201ENST00000455554 PNLIPP16233 465 aa4.44□□□□□ -1.7
LINC02540-201ENST00000455554 NMIQ13287 307 aaPredicted RBP4.44□□□□□ -1.7
LINC02540-201ENST00000455554 FRMD5Q7Z6J6 570 aa4.44□□□□□ -1.7
LINC02540-201ENST00000455554 LINC01356Q8N9X3 169 aa4.44□□□□□ -1.7
LINC02540-201ENST00000455554 TP53I13Q8NBR0 393 aaPredicted RBP4.44□□□□□ -1.7
LINC02540-201ENST00000455554 SYTL5Q8TDW5 730 aaPredicted RBP4.44□□□□□ -1.7
LINC02540-201ENST00000455554 CCDC74BQ96LY2 380 aa4.44□□□□□ -1.7
LINC02540-201ENST00000455554 CILPO75339 1184 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 BPNT1O95861 308 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 ERVFRD-1P60508 538 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 PLP2Q04941 152 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 ZPBP2Q6X784 338 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 CCDC84Q86UT8 332 aaPredicted RBP4.43□□□□□ -1.7
LINC02540-201ENST00000455554 USHBP1Q8N6Y0 703 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 DAGLBQ8NCG7 672 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 HHIPL1Q96JK4 782 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 PWWP2AQ96N64 755 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 PLCD4Q9BRC7 762 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 BDH2Q9BUT1 245 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 HDAC8Q9BY41 377 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 FOXP3Q9BZS1 431 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 TLR6Q9Y2C9 796 aa4.43□□□□□ -1.7
LINC02540-201ENST00000455554 SSU72P8A0A1W2PR75 194 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 PRICKLE3O43900 615 aaPredicted RBP4.42□□□□□ -1.7
LINC02540-201ENST00000455554 MPOP05164 745 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 PCBP3P57721 371 aaKnown RBP4.42□□□□□ -1.7
LINC02540-201ENST00000455554 RTP1P59025 263 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 CHMP4BP1P59074 171 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 LDHDQ86WU2 507 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 IGDCC3Q8IVU1 814 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 REV1Q9UBZ9 1251 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 KLHL3Q9UH77 587 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 TCFL5Q9UL49 500 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 AK5Q9Y6K8 562 aa4.42□□□□□ -1.7
LINC02540-201ENST00000455554 TMEM82A0PJX8 343 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 CHURC1-FNTBB4DL54 471 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 DNAJA2O60884 412 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 BRD1O95696 1058 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 INSRRP14616 1297 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 ARL4AP40617 200 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 TMEM62Q0P6H9 643 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 BNC2Q6ZN30 1099 aaPredicted RBP4.41□□□□□ -1.7
LINC02540-201ENST00000455554 TMC6Q7Z403 805 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 PHACTR4Q8IZ21 702 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 ZNF655Q8N720 491 aaPredicted RBP4.41□□□□□ -1.7
LINC02540-201ENST00000455554 LINC00116Q8NCU8 138 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 PHC3Q8NDX5 983 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 VWCEQ96DN2 955 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 TCTN2Q96GX1 697 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 KLHL14Q9P2G3 628 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 PRR36Q9H6K5 1346 aa4.41□□□□□ -1.7
LINC02540-201ENST00000455554 FAM221AA4D161 298 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 FKTNO75072 461 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 PRPF40AO75400 957 aaKnown RBP4.4□□□□□ -1.71
LINC02540-201ENST00000455554 GBP1P32455 592 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 NCKAP1LP55160 1127 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 RNF4P78317 190 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 PUM1Q14671 1186 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC02540-201ENST00000455554 RTP5Q14D33 572 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 MEI1Q5TIA1 1274 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 GALNT18Q6P9A2 607 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 KIF2CQ99661 725 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 NOC4LQ9BVI4 516 aaKnown RBP4.4□□□□□ -1.71
LINC02540-201ENST00000455554 TNFRSF10DQ9UBN6 386 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 PCDHA5Q9Y5H7 936 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 TAF6LQ9Y6J9 622 aa4.4□□□□□ -1.71
LINC02540-201ENST00000455554 WTIPA6NIX2 430 aaPredicted RBP4.39□□□□□ -1.71
LINC02540-201ENST00000455554 F6X3S4 739 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 BUB1BO60566 1050 aaPredicted RBP4.39□□□□□ -1.71
LINC02540-201ENST00000455554 HTR3BO95264 441 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 SYPP08247 313 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 CEBPAP49715 358 aaPredicted RBP4.39□□□□□ -1.71
LINC02540-201ENST00000455554 LAPTM5Q13571 262 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 RAB3GAP1Q15042 981 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 BBS9Q3SYG4 887 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 HSF5Q4G112 596 aaPredicted RBP4.39□□□□□ -1.71
LINC02540-201ENST00000455554 GATAD2BQ8WXI9 593 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms