RNA–Protein interactions for RNA: ENST00000455372.2

SLC39A3-202, Transcript of solute carrier family 39 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC39A3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-202ENST00000455372 PCDHA4Q9UN74 947 aa20.78■□□□□ 0.92
SLC39A3-202ENST00000455372 MTMR7Q9Y216 660 aa20.78■□□□□ 0.92
SLC39A3-202ENST00000455372 UFL1O94874 794 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 CD209Q9NNX6 404 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 SH3GLB2Q9NR46 395 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 CDK5RAP2Q96SN8 1893 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 SYNRGQ9UMZ2 1314 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 CYTH3O43739 400 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 LDHCP07864 332 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 RASA1P20936 1047 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 NR1I3Q14994 352 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 ZNF444Q8N0Y2 327 aaPredicted RBP20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 C4orf32Q8N8J7 132 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 GJD4Q96KN9 370 aaPredicted RBP20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 BLZF1Q9H2G9 400 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 TCP11L1Q9NUJ3 509 aa20.77■□□□□ 0.92
SLC39A3-202ENST00000455372 PPP1R3GB7ZBB8 358 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 BTDP43251 543 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 NT5C2P49902 561 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 CT47A1Q5JQC4 288 aaPredicted RBP20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 SPATA1Q5VX52 437 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 PDXDC2PQ6P474 469 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 APTXQ7Z2E3 356 aaKnown RBP20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 TC2NQ8N9U0 490 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 IQUBQ8NA54 791 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 MTRQ99707 1265 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 STX8Q9UNK0 236 aa20.77■□□□□ 0.91
SLC39A3-202ENST00000455372 A0A1B0GTH6 734 aa20.76■□□□□ 0.91
SLC39A3-202ENST00000455372 CRY2Q49AN0 593 aa20.76■□□□□ 0.91
SLC39A3-202ENST00000455372 TMEM47Q9BQJ4 181 aa20.76■□□□□ 0.91
SLC39A3-202ENST00000455372 ADKP55263 362 aaKnown RBP20.76■□□□□ 0.91
SLC39A3-202ENST00000455372 WWC2Q6AWC2 1192 aa20.76■□□□□ 0.91
SLC39A3-202ENST00000455372 CERKQ8TCT0 537 aa20.76■□□□□ 0.91
SLC39A3-202ENST00000455372 M0R2N6 131 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 CCDC178Q5BJE1 867 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 REXO1L1PQ8IX06 675 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 V9GYY5 206 aaPredicted RBP20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 GYS1P13807 737 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 CDC25AP30304 524 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 GNAQP50148 359 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
SLC39A3-202ENST00000455372 ARHGAP6O43182 974 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 CCP110O43303 1012 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 ARL6IP4Q66PJ3 421 aaKnown RBP20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 BAG1Q99933 345 aaPredicted RBP20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 L2HGDHQ9H9P8 463 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 TEX33O43247 280 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 ADRA2BP18089 450 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 CDKAL1Q5VV42 579 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 PCDHA6Q9UN73 950 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 PCDHA8Q9Y5H6 950 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 PALM3A6NDB9 673 aaPredicted RBP20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 SERPINB2P05120 415 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 IL1R1P14778 569 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 ETF1P62495 437 aaKnown RBP20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 TRIM65Q6PJ69 517 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 HEATR3Q7Z4Q2 680 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 FCHSD1Q86WN1 690 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 GGA1Q9UJY5 639 aa20.74■□□□□ 0.91
SLC39A3-202ENST00000455372 EP400Q96L91 3159 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 SNED1Q8TER0 1413 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 GPR75-ASB3A0A0A6YYF3 556 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 SLU7O95391 586 aaKnown RBP20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 COBLO75128 1261 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 ATP2B4P23634 1241 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 LONP1P36776 959 aaKnown RBP20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 CDK8P49336 464 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 TEX11Q8IYF3 940 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 ERO1AQ96HE7 468 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 CPVLQ9H3G5 476 aa20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 DDX60LQ5H9U9 1706 aaKnown RBP20.73■□□□□ 0.91
SLC39A3-202ENST00000455372 CCDC194A0A1B0GVG4 234 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 STXBP3O00186 592 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 BARHL2Q9NY43 387 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 CTNND2Q9UQB3 1225 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 PPP2R2CQ9Y2T4 447 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 FANCGO15287 622 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 GTPBP6O43824 516 aaPredicted RBP20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 TUBB4AP04350 444 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 ST5P78524 1137 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 C16orf86Q6ZW13 317 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 DNAI1Q9UI46 699 aa20.72■□□□□ 0.91
SLC39A3-202ENST00000455372 STX10O60499 249 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 INF2Q27J81 1249 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 CCDC93Q567U6 631 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 DAGLBQ8NCG7 672 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 RBM17Q96I25 401 aaKnown RBP20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 EYA3Q99504 573 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 PYM1Q9BRP8 204 aaKnown RBP20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 TMEM60Q9H2L4 133 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 ADD3Q9UEY8 706 aaKnown RBP20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 POLLQ9UGP5 575 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 FLT1P17948 1338 aa20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 KARSQ15046 597 aaKnown RBP20.71■□□□□ 0.91
SLC39A3-202ENST00000455372 MFSD14BQ5SR56 506 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms