RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 WBP1LQ9NX94 342 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 HOXC10Q9NYD6 342 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 DDAH1O94760 285 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 PDHBP11177 359 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 COG2Q14746 738 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 KIAA1755Q5JYT7 1200 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 SYNE3Q6ZMZ3 975 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
HMGXB4-204ENST00000455359 RAD21O60216 631 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 FDX1P10109 184 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 GCLCP48506 637 aaPredicted RBP16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 EVCP57679 992 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 TROAPQ12815 778 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 COL9A3Q14050 684 aaPredicted RBP16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 TAF1CQ15572 869 aaPredicted RBP16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 FAM83BQ5T0W9 1011 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 TANGO6Q9C0B7 1094 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 RNF186Q9NXI6 227 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
HMGXB4-204ENST00000455359 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 DGKZQ13574 1117 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 RABEP1Q15276 862 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 Q6ZUG5 572 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 MB21D1Q8N884 522 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 LRRC2Q9BYS8 371 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 UPF3BQ9BZI7 483 aaKnown RBP16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 PHIPQ8WWQ0 1821 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 ATAD5Q96QE3 1844 aa16.71■□□□□ 0.27
HMGXB4-204ENST00000455359 TLR2O60603 784 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 FLOT1O75955 427 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 PARP1P09874 1014 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 CPA1P15085 419 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 DSG3P32926 999 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 KIF5BP33176 963 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 STAT2P52630 851 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 BTNL9Q6UXG8 535 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 KIF2CQ99661 725 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 SLF1Q9BQI6 1058 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 PPP1R9AQ9ULJ8 1098 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 ADAMTS5Q9UNA0 930 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 MYH8P13535 1937 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 GNAQP50148 359 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 HERVK_113P62684 666 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 GRM4Q14833 912 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 BRF1Q92994 677 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 LZTS2Q9BRK4 669 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 SENP2Q9HC62 589 aa16.7■□□□□ 0.26
HMGXB4-204ENST00000455359 PALM3A6NDB9 673 aaPredicted RBP16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 TMEM232C9JQI7 657 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 ZBTB43O43298 467 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 TRPA1O75762 1119 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 CYP2C8P10632 490 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 NEK4P51957 841 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 CRHR2Q13324 411 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 ADGRA2Q96PE1 1338 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
HMGXB4-204ENST00000455359 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 CCDC196A0A1B0GTZ2 297 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 C17orf99Q6UX52 265 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 RBM28Q9NW13 759 aaKnown RBP16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 ISY1Q9ULR0 285 aaKnown RBP16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 RABGAP1Q9Y3P9 1069 aa16.68■□□□□ 0.26
HMGXB4-204ENST00000455359 LOC285556D6RIA3 1793 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 ZBED4O75132 1171 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 OAZ1P54368 228 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 IKQ13123 557 aaPredicted RBP16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
HMGXB4-204ENST00000455359 MORF4L1Q9UBU8 362 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms