RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CHMP4CQ96CF2 233 aa19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 WNK4Q96J92 1243 aa19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 MTMR7Q9Y216 660 aa19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 LOC285556D6RIA3 1793 aa19.33■□□□□ 0.68
CCDC90B-202ENST00000455220 A0A0G2JLL6 359 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 DHX16O60231 1041 aaKnown RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 NTRK3Q16288 839 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 TMTC3Q6ZXV5 915 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 PRRT2Q7Z6L0 340 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 SPICE1Q8N0Z3 855 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 HHIPL1Q96JK4 782 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 WDR46O15213 610 aaKnown RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 ZBTB48P10074 688 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 BMP3P12645 472 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 GNAQP50148 359 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 HMGCS2P54868 508 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 STAG2Q8N3U4 1231 aa19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 INTS4Q96HW7 963 aaKnown RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-202ENST00000455220 RAD21O60216 631 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 CTDNEP1O95476 244 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 IFNAR1P17181 557 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 VCAM1P19320 739 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 FUT2Q10981 343 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 DGKZQ13574 1117 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 RGMBQ6NW40 437 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 NUP88Q99567 741 aaPredicted RBP19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 LZTS2Q9BRK4 669 aa19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 LLPHQ9BRT6 129 aaKnown RBP19.31■□□□□ 0.68
CCDC90B-202ENST00000455220 FRMPD2Q68DX3 1309 aaPredicted RBP19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 KLRF2D3W0D1 207 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 GOLGA8HP0CJ92 632 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 SMARCA1P28370 1054 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 CCDC96Q2M329 555 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 KCTD1Q719H9 257 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 PROCA1Q8NCQ7 364 aaPredicted RBP19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 NSUN7Q8NE18 718 aaKnown RBP19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 TMOD4Q9NZQ9 345 aa19.3■□□□□ 0.68
CCDC90B-202ENST00000455220 CPLX1O14810 134 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 PLA2G6O60733 806 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 CDKL5O76039 1030 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 APLP1P51693 650 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 SNAPC2Q13487 334 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 MOGSQ13724 837 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 CPLX2Q6PUV4 134 aaKnown RBP19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 BTNL9Q6UXG8 535 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 SRBD1Q8N5C6 995 aaKnown RBP19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 SPZ1Q9BXG8 430 aa19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 ABT1Q9ULW3 272 aaKnown RBP19.29■□□□□ 0.68
CCDC90B-202ENST00000455220 ZNF157P51786 506 aaPredicted RBP19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 SLC35G1Q2M3R5 365 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 TTBK2Q6IQ55 1244 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 NBPF11Q86T75 865 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 IPO9Q96P70 1041 aaKnown RBP19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 GPCPD1Q9NPB8 672 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 CREBZFQ9NS37 354 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 CNTNAP5Q8WYK1 1306 aa19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 BAZ2BQ9UIF8 2168 aaKnown RBP19.28■□□□□ 0.68
CCDC90B-202ENST00000455220 CYTH3O43739 400 aa19.27■□□□□ 0.68
CCDC90B-202ENST00000455220 SLC10A3P09131 477 aa19.27■□□□□ 0.68
CCDC90B-202ENST00000455220 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
CCDC90B-202ENST00000455220 RIOX1Q9H6W3 641 aa19.27■□□□□ 0.68
CCDC90B-202ENST00000455220 PARP14Q460N5 1801 aa19.27■□□□□ 0.68
CCDC90B-202ENST00000455220 PTPDC1A2A3K4 754 aa19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 TMEM232C9JQI7 657 aa19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 GTF2A2P52657 109 aa19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 CMTR1Q8N1G2 835 aaKnown RBP19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 RNF26Q9BY78 433 aaPredicted RBP19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 RPAP3Q9H6T3 665 aaPredicted RBP19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 FEM1BQ9UK73 627 aa19.27■□□□□ 0.67
CCDC90B-202ENST00000455220 STK36Q9NRP7 1315 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 RLFQ13129 1914 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 JAK2O60674 1132 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 FMNL1O95466 1100 aaPredicted RBP19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 STAT2P52630 851 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 FAM160B2Q86V87 743 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 UBA5Q9GZZ9 404 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 CPVLQ9H3G5 476 aa19.26■□□□□ 0.67
CCDC90B-202ENST00000455220 FAM155AB1AL88 458 aaPredicted RBP19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 CETPP11597 493 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 HMGN5P82970 282 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 TREML2Q5T2D2 321 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 CATSPERGQ6ZRH7 1159 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 CHURC1Q8WUH1 139 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 PHKBQ93100 1093 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-202ENST00000455220 AGTPBP1Q9UPW5 1226 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms