RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 VCPKMTQ9H867 229 aa26.35■■□□□ 1.81
HMG20B-206ENST00000453933 TMEM39AQ9NV64 488 aa26.35■■□□□ 1.81
HMG20B-206ENST00000453933 A0A1W2PQ45 241 aaPredicted RBP26.34■■□□□ 1.81
HMG20B-206ENST00000453933 A0A1W2PQY0 241 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 SLC25A27O95847 323 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 AKR1B1P15121 316 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 FPGSQ05932 587 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 ZNF792Q3KQV3 632 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 LCORLQ8N3X6 602 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 ARHGEF10LQ9HCE6 1279 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 SWAP70Q9UH65 585 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 ADAMTS5Q9UNA0 930 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 EXOC6BQ9Y2D4 811 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 ZNF532Q9HCE3 1301 aa26.34■■□□□ 1.81
HMG20B-206ENST00000453933 ZNF865P0CJ78 1059 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-206ENST00000453933 RLBP1P12271 317 aa26.33■■□□□ 1.81
HMG20B-206ENST00000453933 ICA1Q05084 483 aa26.33■■□□□ 1.81
HMG20B-206ENST00000453933 FAAP100Q0VG06 881 aa26.33■■□□□ 1.81
HMG20B-206ENST00000453933 TTF1Q15361 905 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-206ENST00000453933 LENG1Q96BZ8 264 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-206ENST00000453933 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.32■■□□□ 1.8
HMG20B-206ENST00000453933 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.32■■□□□ 1.8
HMG20B-206ENST00000453933 SMIM22K7EJ46 135 aa26.32■■□□□ 1.8
HMG20B-206ENST00000453933 WDR46O15213 610 aaKnown RBP26.32■■□□□ 1.8
HMG20B-206ENST00000453933 DNAJB2P25686 324 aa26.32■■□□□ 1.8
HMG20B-206ENST00000453933 RIOX2Q8IUF8 465 aa26.32■■□□□ 1.8
HMG20B-206ENST00000453933 FBXO28Q9NVF7 368 aa26.32■■□□□ 1.8
HMG20B-206ENST00000453933 TCRBV5S4A2TA0A5A2 114 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 ADAMTS4O75173 837 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 KCTD2Q14681 263 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 CEP85Q6P2H3 762 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 ERC1Q8IUD2 1116 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 SH2D4AQ9H788 454 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 IL1RAPL2Q9NP60 686 aa26.31■■□□□ 1.8
HMG20B-206ENST00000453933 DIS3Q9Y2L1 958 aaKnown RBP26.31■■□□□ 1.8
HMG20B-206ENST00000453933 PRKAB2O43741 272 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 HNRNPUQ00839 825 aaKnown RBP eCLIP26.3■■□□□ 1.8
HMG20B-206ENST00000453933 TJAP1Q5JTD0 557 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 ANKRD33Q7Z3H0 272 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 TOX2Q96NM4 488 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 ZNF576Q9H609 170 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 ARMT1Q9H993 441 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 TTC28Q96AY4 2481 aa26.3■■□□□ 1.8
HMG20B-206ENST00000453933 AKR1A1P14550 325 aa26.29■■□□□ 1.8
HMG20B-206ENST00000453933 STAT3P40763 770 aa26.29■■□□□ 1.8
HMG20B-206ENST00000453933 ACLYP53396 1101 aa26.29■■□□□ 1.8
HMG20B-206ENST00000453933 NAV1Q8NEY1 1877 aa26.29■■□□□ 1.8
HMG20B-206ENST00000453933 DCDC2CA8MYV0 355 aa26.28■■□□□ 1.8
HMG20B-206ENST00000453933 GOLIM4O00461 696 aa26.28■■□□□ 1.8
HMG20B-206ENST00000453933 VWA5AO00534 786 aa26.28■■□□□ 1.8
HMG20B-206ENST00000453933 EEF2P13639 858 aaKnown RBP26.28■■□□□ 1.8
HMG20B-206ENST00000453933 CCDC17Q96LX7 622 aa26.28■■□□□ 1.8
HMG20B-206ENST00000453933 TSEN34Q9BSV6 310 aaKnown RBP26.28■■□□□ 1.8
HMG20B-206ENST00000453933 STARD7Q9NQZ5 370 aa26.28■■□□□ 1.8
HMG20B-206ENST00000453933 SMCHD1A6NHR9 2005 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 CYP2D7A0A087X1C5 515 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 CDK8P49336 464 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 SLFNL1Q499Z3 407 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 TIFAQ96CG3 184 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 DNAJC2Q99543 621 aaKnown RBP26.27■■□□□ 1.8
HMG20B-206ENST00000453933 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.27■■□□□ 1.86e-8■■□□□ 11.7
HMG20B-206ENST00000453933 ZNF214Q9UL59 606 aaPredicted RBP26.27■■□□□ 1.8
HMG20B-206ENST00000453933 CNPY2Q9Y2B0 182 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 ROBO3Q96MS0 1386 aa26.27■■□□□ 1.8
HMG20B-206ENST00000453933 TIMP1P01033 207 aa26.26■■□□□ 1.79
HMG20B-206ENST00000453933 C12orf60Q5U649 245 aa26.26■■□□□ 1.79
HMG20B-206ENST00000453933 KLHDC9Q8NEP7 349 aa26.26■■□□□ 1.79
HMG20B-206ENST00000453933 REPS2Q8NFH8 660 aa26.26■■□□□ 1.79
HMG20B-206ENST00000453933 PPP1R9AQ9ULJ8 1098 aa26.26■■□□□ 1.79
HMG20B-206ENST00000453933 SYNRGQ9UMZ2 1314 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 TNFRSF10AO00220 468 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 KCNA10Q16322 511 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 HSP90AB4PQ58FF6 505 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 CCSAPQ6IQ19 270 aaPredicted RBP26.25■■□□□ 1.79
HMG20B-206ENST00000453933 C16orf59Q7L2K0 433 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 RHPN1Q8TCX5 695 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 NUP133Q8WUM0 1156 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 ATP8A2Q9NTI2 1148 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 TBX21Q9UL17 535 aa26.25■■□□□ 1.79
HMG20B-206ENST00000453933 MBD4O95243 580 aa26.24■■□□□ 1.79
HMG20B-206ENST00000453933 SNAI1O95863 264 aaPredicted RBP26.24■■□□□ 1.79
HMG20B-206ENST00000453933 KANSL2Q9H9L4 492 aa26.24■■□□□ 1.79
HMG20B-206ENST00000453933 MYADML2A6NDP7 307 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 GRXCR1A8MXD5 290 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 USP17L12C9JPN9 530 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 USP17L21D6R901 530 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 COL9A1P20849 921 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 PBX2P40425 430 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 IRX5P78411 483 aaPredicted RBP26.23■■□□□ 1.79
HMG20B-206ENST00000453933 FAM83BQ5T0W9 1011 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 MFSD5Q6N075 450 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.23■■□□□ 1.79
HMG20B-206ENST00000453933 PPM1EQ8WY54 764 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 FAM184BQ9ULE4 1060 aa26.23■■□□□ 1.79
HMG20B-206ENST00000453933 ZNFX1Q9P2E3 1918 aaKnown RBP26.22■■□□□ 1.79
HMG20B-206ENST00000453933 MOXD2PA6NHM9 499 aa26.22■■□□□ 1.79
HMG20B-206ENST00000453933 RAD21O60216 631 aa26.22■■□□□ 1.79
HMG20B-206ENST00000453933 C16orf86Q6ZW13 317 aa26.22■■□□□ 1.79
HMG20B-206ENST00000453933 PANK1Q8TE04 598 aa26.22■■□□□ 1.79
HMG20B-206ENST00000453933 PBX4Q9BYU1 374 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms