RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 DBNDD2Q9BQY9 259 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 KCNF1Q9H3M0 494 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 OAS3Q9Y6K5 1087 aaKnown RBP5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 CCDC163A0A0D9SF12 145 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 SHOXO15266 292 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 SART1O43290 800 aaKnown RBP5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 SLITRK5O94991 958 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 TP53P04637 393 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 SPINK2P20155 84 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 GYS2P54840 703 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 TCEA2Q15560 299 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 PTPROQ16827 1216 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 TKFCQ3LXA3 575 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 SGO2Q562F6 1265 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 RNF187Q5TA31 235 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 LETMD1Q6P1Q0 360 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 RIN3Q8TB24 985 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 KREMEN1Q96MU8 473 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 SSU72Q9NP77 194 aaKnown RBP5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 ARHGEF4Q9NR80 690 aa5.41□□□□□ -1.54
HMGB1P15-201ENST00000453854 A0A087WZG4 1122 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 DYNC1LI2O43237 492 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 NFICP08651 508 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 RAB6AP20340 208 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 HOXA10P31260 410 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 USP11P51784 963 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 MAP7Q14244 749 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 HEATR6Q6AI08 1181 aaKnown RBP5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 CCDC144CPQ8IYA2 1237 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 C7orf61Q8IZ16 206 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 XAGE3Q8WTP9 111 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 FBLIM1Q8WUP2 373 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 KISS1RQ969F8 398 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 RCC1LQ96I51 464 aaKnown RBP5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 YIPF2Q9BWQ6 316 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 ASPNQ9BXN1 380 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 SLKQ9H2G2 1235 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 SPC25Q9HBM1 224 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 IFT57Q9NWB7 429 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 ZNF451Q9Y4E5 1061 aa5.4□□□□□ -1.54
HMGB1P15-201ENST00000453854 ABCC9O60706 1549 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 AGRPO00253 132 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 GAS2O43903 313 aaKnown RBP5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 DNAJC6O75061 913 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 ASMTLO95671 621 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 CD247P20963 164 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 MAP4P27816 1152 aaKnown RBP5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 GP2P55259 537 aaKnown RBP5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 RNF4P78317 190 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 AUHQ13825 339 aaKnown RBP5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 SV2CQ496J9 727 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 FOXB2Q5VYV0 432 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 DCAF15Q66K64 600 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 FILIP1Q7Z7B0 1213 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 DTX1Q86Y01 620 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 RNF141Q8WVD5 230 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 ZNF512BQ96KM6 892 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 MFSD14AQ96MC6 490 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 MIPEPQ99797 713 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 PRDM10Q9NQV6 1147 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 C1GALT1Q9NS00 363 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 FAM86C1Q9NVL1 165 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 PRR13Q9NZ81 148 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 WHRNQ9P202 907 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 APEX2Q9UBZ4 518 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 DAGLAQ9Y4D2 1042 aa5.39□□□□□ -1.55
HMGB1P15-201ENST00000453854 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 PPP1R12AO14974 1030 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 RFPL3O75679 317 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 EOMESO95936 686 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 ITGAVP06756 1048 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 VIL1P09327 827 aaKnown RBP5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 FGFR1P11362 822 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 ETV3P41162 512 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 MASP1P48740 699 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 PPP2R2AP63151 447 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 HSP90AA2PQ14568 343 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 NBPF9Q3BBW0 867 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 CDH24Q86UP0 819 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 ZNF227Q86WZ6 799 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 ARHGEF39Q8N4T4 335 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 BVESQ8NE79 360 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 EXOC2Q96KP1 924 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 MRGPRX3Q96LB0 322 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 DHRS4Q9BTZ2 278 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 MKRN2Q9H000 416 aaKnown RBP5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 GP6Q9HCN6 339 aa5.38□□□□□ -1.55
HMGB1P15-201ENST00000453854 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 FAM95CA0A1B0GW59 222 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 PPM1BO75688 479 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 F13BP05160 661 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 TAF7LQ5H9L4 462 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 FAM214BQ7L5A3 538 aa5.37□□□□□ -1.55
HMGB1P15-201ENST00000453854 SCUBE1Q8IWY4 988 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms