RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 FLOT1O75955 427 aa17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 DCAF4Q8WV16 495 aa17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 R3HDMLQ9H3Y0 253 aa17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 WDR19Q8NEZ3 1342 aa17.12■□□□□ 0.33
NCKIPSD-207ENST00000453349 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 ANAPC15P60006 121 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 HERVK_113P62684 666 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 FGD1P98174 961 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 NOM1Q5C9Z4 860 aaKnown RBP17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 C17orf99Q6UX52 265 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 CHURC1Q8WUH1 139 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 CPA4Q9UI42 421 aa17.11■□□□□ 0.33
NCKIPSD-207ENST00000453349 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 HSPA8P11142 646 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 DSG3P32926 999 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 SP3Q02447 781 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 CATIPQ7Z7H3 387 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 FAM160B2Q86V87 743 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 CYP46A1Q9Y6A2 500 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 MYPNQ86TC9 1320 aa17.1■□□□□ 0.33
NCKIPSD-207ENST00000453349 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 FKTNO75072 461 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 PDHBP11177 359 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 RPS6KB1P23443 525 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 LIFRP42702 1097 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 STAT2P52630 851 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 LBX1P52954 281 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 KIF22Q14807 665 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 SYNE3Q6ZMZ3 975 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 KCTD1Q719H9 257 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 LRRC2Q9BYS8 371 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
NCKIPSD-207ENST00000453349 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 PLA2G6O60733 806 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 CPA1P15085 419 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 GPATCH4Q5T3I0 446 aaKnown RBP17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 MB21D1Q8N884 522 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 GPRC5AQ8NFJ5 357 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 KIFC2Q96AC6 838 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 TCEANC2Q96MN5 208 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 RABGAP1Q9Y3P9 1069 aa17.08■□□□□ 0.32
NCKIPSD-207ENST00000453349 FRMPD2Q68DX3 1309 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 ZBED4O75132 1171 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 PARP1P09874 1014 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 SNHG28P0DPA3 235 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 FDX1P10109 184 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 BCRP11274 1271 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 COL9A3Q14050 684 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 ARHGEF6Q15052 776 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 Q6ZUG5 572 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 ZNF296Q8WUU4 475 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 FBXO28Q9NVF7 368 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 RBPJLQ9UBG7 517 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
NCKIPSD-207ENST00000453349 CALM1P0DP23 149 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 CALM2P0DP24 149 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 CALM3P0DP25 149 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 ASPRV1Q53RT3 343 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 CCAR1Q8IX12 1150 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 ATG4CQ96DT6 458 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 MORF4L1Q9UBU8 362 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
NCKIPSD-207ENST00000453349 VWA5AO00534 786 aa17.05■□□□□ 0.32
NCKIPSD-207ENST00000453349 DDAH1O94760 285 aa17.05■□□□□ 0.32
NCKIPSD-207ENST00000453349 GOLGA8HP0CJ92 632 aa17.05■□□□□ 0.32
NCKIPSD-207ENST00000453349 ERVK-9P63128 1117 aa17.05■□□□□ 0.32
NCKIPSD-207ENST00000453349 ERVK-24P63145 666 aa17.05■□□□□ 0.32
NCKIPSD-207ENST00000453349 CCNA1P78396 465 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms