RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
HDLBP-226ENST00000453141 FOXD4L1Q9NU39 408 aa9.02□□□□□ -0.97
HDLBP-226ENST00000453141 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
HDLBP-226ENST00000453141 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.97
HDLBP-226ENST00000453141 TCHHQ07283 1943 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 A0A0D9SFI3 127 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 A0A0G2JMZ2 1700 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 HOXD11P31277 338 aaPredicted RBP9.01□□□□□ -0.97
HDLBP-226ENST00000453141 NEK4P51957 841 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 ICA1Q05084 483 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 MAP2K5Q13163 448 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 COG2Q14746 738 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 CCL14Q16627 93 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 DOCK3Q8IZD9 2030 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 DYNLL2Q96FJ2 89 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 FAM227BQ96M60 508 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 TANGO6Q9C0B7 1094 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 OGDHLQ9ULD0 1010 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 SNX14Q9Y5W7 946 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 IVNS1ABPQ9Y6Y0 642 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 SZT2Q5T011 3432 aa9.01□□□□□ -0.97
HDLBP-226ENST00000453141 CYP2D7A0A087X1C5 515 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 SLC15A5A6NIM6 579 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 USP17L12C9JPN9 530 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 USP17L21D6R901 530 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 CHGBP05060 677 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 AKR1B1P15121 316 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 PTMSP20962 102 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 PTPREP23469 700 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
HDLBP-226ENST00000453141 GRB14Q14449 540 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 C12orf60Q5U649 245 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 C16orf86Q6ZW13 317 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 TICAM2Q86XR7 235 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 CLEC10AQ8IUN9 316 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 KBTBD3Q8NAB2 608 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 LPAR1Q92633 364 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 CCDC17Q96LX7 622 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 PUS7LQ9H0K6 701 aaKnown RBP9□□□□□ -0.97
HDLBP-226ENST00000453141 PRO3102Q9H379 93 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 C11orf49Q9H6J7 331 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 SH2D4AQ9H788 454 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 HOXC10Q9NYD6 342 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 ARPP21Q9UBL0 812 aaPredicted RBP9□□□□□ -0.97
HDLBP-226ENST00000453141 TMX2Q9Y320 296 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 RBM8AQ9Y5S9 174 aaKnown RBP9□□□□□ -0.97
HDLBP-226ENST00000453141 SLC4A4Q9Y6R1 1079 aa9□□□□□ -0.97
HDLBP-226ENST00000453141 ZNF236Q9UL36 1845 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 A0A1W2PPC1 479 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 SMIM22K7EJ46 135 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 HOXC6P09630 235 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 CCND3P30281 292 aaPredicted RBP8.99□□□□□ -0.97
HDLBP-226ENST00000453141 MCM4P33991 863 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 CDK8P49336 464 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 NUCB2P80303 420 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 PTH1RQ03431 593 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 LRRFIP1Q32MZ4 808 aaKnown RBP8.99□□□□□ -0.97
HDLBP-226ENST00000453141 KIAA1755Q5JYT7 1200 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 MFSD14CQ5VZR4 134 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 LHX8Q68G74 356 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 CTR9Q6PD62 1173 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 SIAH1Q8IUQ4 282 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 C7orf61Q8IZ16 206 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 SPICE1Q8N0Z3 855 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 MB21D1Q8N884 522 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 MOV10L1Q9BXT6 1211 aaKnown RBP8.99□□□□□ -0.97
HDLBP-226ENST00000453141 UPF3BQ9BZI7 483 aaKnown RBP8.99□□□□□ -0.97
HDLBP-226ENST00000453141 VCPKMTQ9H867 229 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 FLRT1Q9NZU1 646 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 PFASO15067 1338 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 TRIOBPQ9H2D6 2365 aa8.99□□□□□ -0.97
HDLBP-226ENST00000453141 MYH8P13535 1937 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 ALPK3Q96L96 1907 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 WDR46O15213 610 aaKnown RBP8.98□□□□□ -0.97
HDLBP-226ENST00000453141 STRNO43815 780 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 FLOT1O75955 427 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 CASTP20810 708 aaKnown RBP8.98□□□□□ -0.97
HDLBP-226ENST00000453141 ADORA2AP29274 412 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 DSG3P32926 999 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 ATP2B2Q01814 1243 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 CUL4AQ13619 759 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 NOL8Q76FK4 1167 aaKnown RBP8.98□□□□□ -0.97
HDLBP-226ENST00000453141 DPP9Q86TI2 863 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 SHCBP1Q8NEM2 672 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 KCNB2Q92953 911 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 TNPO1Q92973 898 aaKnown RBP8.98□□□□□ -0.97
HDLBP-226ENST00000453141 TMX3Q96JJ7 454 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 JAKMIP1Q96N16 626 aaKnown RBP8.98□□□□□ -0.97
HDLBP-226ENST00000453141 TM6SF1Q9BZW5 370 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 SPATC1LQ9H0A9 340 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 KANSL2Q9H9L4 492 aa8.98□□□□□ -0.97
HDLBP-226ENST00000453141 BAZ2AQ9UIF9 1905 aaKnown RBP8.97□□□□□ -0.97
HDLBP-226ENST00000453141 LAMA3Q16787 3333 aa8.97□□□□□ -0.97
HDLBP-226ENST00000453141 GSG1L2A8MUP6 293 aa8.97□□□□□ -0.97
HDLBP-226ENST00000453141 MSCO60682 206 aa8.97□□□□□ -0.97
HDLBP-226ENST00000453141 ZFYP08048 801 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-226ENST00000453141 COL6A1P12109 1028 aa8.97□□□□□ -0.97
HDLBP-226ENST00000453141 EEF2P13639 858 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms