RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 STRNO43815 780 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 SMARCA5O60264 1052 aaPredicted RBP14.05□□□□□ -0.16
GARNL3-210ENST00000453030 IGHA2P01877 340 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 GPR153Q6NV75 609 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 C16orf86Q6ZW13 317 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
GARNL3-210ENST00000453030 MROH8Q9H579 483 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 FBXO28Q9NVF7 368 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 ATP11BQ9Y2G3 1177 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 SEPT4O43236 478 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
GARNL3-210ENST00000453030 TMEM132BQ14DG7 1078 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 PRAMEF19Q5SWL8 479 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 MAML3Q96JK9 1138 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 CCDC17Q96LX7 622 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 LRRCC1Q9C099 1032 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 PUS7LQ9H0K6 701 aaKnown RBP14.04□□□□□ -0.16
GARNL3-210ENST00000453030 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-210ENST00000453030 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
GARNL3-210ENST00000453030 FCER1AP12319 257 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 UBE3CQ15386 1083 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 FAM47AQ5JRC9 791 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 C20orf194Q5TEA3 1177 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 STK11IPQ8N1F8 1099 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 MMP19Q99542 508 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 MTMR10Q9NXD2 777 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 RCAN3Q9UKA8 241 aa14.03□□□□□ -0.16
GARNL3-210ENST00000453030 DLL1O00548 723 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 PGK2P07205 417 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 TRIM60Q495X7 471 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 FAM83BQ5T0W9 1011 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 ZSCAN25Q6NSZ9 544 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 CTR9Q6PD62 1173 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 ABRAQ8N0Z2 381 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 FERMT2Q96AC1 680 aa14.02□□□□□ -0.17
GARNL3-210ENST00000453030 CHMP4BQ9H444 224 aaKnown RBP14.02□□□□□ -0.17
GARNL3-210ENST00000453030 ARPP21Q9UBL0 812 aaPredicted RBP14.02□□□□□ -0.17
GARNL3-210ENST00000453030 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 SLC25A27O95847 323 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 LRRC41Q15345 812 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 SLC39A5Q6ZMH5 540 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-210ENST00000453030 KANSL2Q9H9L4 492 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
GARNL3-210ENST00000453030 VCANP13611 3396 aa14□□□□□ -0.17
GARNL3-210ENST00000453030 VWA5AO00534 786 aa14□□□□□ -0.17
GARNL3-210ENST00000453030 ADCYAP1R1P41586 468 aa14□□□□□ -0.17
GARNL3-210ENST00000453030 KCTD2Q14681 263 aa14□□□□□ -0.17
GARNL3-210ENST00000453030 LENG1Q96BZ8 264 aaPredicted RBP14□□□□□ -0.17
GARNL3-210ENST00000453030 GNL3Q9BVP2 549 aaKnown RBP eCLIP14□□□□□ -0.17
GARNL3-210ENST00000453030 XPNPEP3Q9NQH7 507 aa14□□□□□ -0.17
GARNL3-210ENST00000453030 ECHDC1Q9NTX5 307 aa14□□□□□ -0.17
GARNL3-210ENST00000453030 ZNF214Q9UL59 606 aaPredicted RBP14□□□□□ -0.17
GARNL3-210ENST00000453030 ROBO3Q96MS0 1386 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 MINDY4BA8MYZ0 360 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 RARBP10826 455 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 TAL1P17542 331 aaPredicted RBP13.99□□□□□ -0.17
GARNL3-210ENST00000453030 STAT3P40763 770 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 SNX17Q15036 470 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 RIOX2Q8IUF8 465 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 REPS2Q8NFH8 660 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 STRBPQ96SI9 672 aaKnown RBP13.99□□□□□ -0.17
GARNL3-210ENST00000453030 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 ADAMTS5Q9UNA0 930 aa13.99□□□□□ -0.17
GARNL3-210ENST00000453030 PGK1P00558 417 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 RASA1P20936 1047 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 C9orf50Q5SZB4 431 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 SNRNP48Q6IEG0 339 aaKnown RBP13.98□□□□□ -0.17
GARNL3-210ENST00000453030 SH3RF1Q7Z6J0 888 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 KBTBD3Q8NAB2 608 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 BADQ92934 168 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 GPATCH3Q96I76 525 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 MKNK2Q9HBH9 465 aa13.98□□□□□ -0.17
GARNL3-210ENST00000453030 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
GARNL3-210ENST00000453030 GSG1L2A8MUP6 293 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 GPAA1O43292 621 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 NDUFB10O96000 172 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 COPB2P35606 906 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 TDO2P48775 406 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 SHHQ15465 462 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 ZNF792Q3KQV3 632 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 SBK1Q52WX2 424 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 APPBP2Q92624 585 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 GUCD1Q96NT3 240 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 TEX13BQ9BXU2 312 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 LRRC37A2A6NM11 1700 aa13.97□□□□□ -0.17
GARNL3-210ENST00000453030 TRIM43BA6NCK2 446 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 F5H6K3 240 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 POTEB2H3BUK9 544 aa13.96□□□□□ -0.17
GARNL3-210ENST00000453030 M0R2C6 588 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms