RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CUL9Q8IWT3 2517 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 PRKAB2O43741 272 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 IFIT2P09913 472 aaKnown RBP14.07□□□□□ -0.16
HERC3-207ENST00000452979 ADD2P35612 726 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 CDK8P49336 464 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 ICA1Q05084 483 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 FAM47AQ5JRC9 791 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 SH3RF1Q7Z6J0 888 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 CLEC10AQ8IUN9 316 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 SPICE1Q8N0Z3 855 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 PANK1Q8TE04 598 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
HERC3-207ENST00000452979 DNAJC2Q99543 621 aaKnown RBP14.07□□□□□ -0.16
HERC3-207ENST00000452979 TINF2Q9BSI4 451 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 PRDM5Q9NQX1 630 aaPredicted RBP14.07□□□□□ -0.16
HERC3-207ENST00000452979 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
HERC3-207ENST00000452979 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 MYH7P12883 1935 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
HERC3-207ENST00000452979 ATP5JP18859 108 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 TLE2Q04725 743 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 ZNF792Q3KQV3 632 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 C16orf86Q6ZW13 317 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 FERMT2Q96AC1 680 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 MMP19Q99542 508 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 KANSL2Q9H9L4 492 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 PAG1Q9NWQ8 432 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 ROBO3Q96MS0 1386 aa14.06□□□□□ -0.16
HERC3-207ENST00000452979 USP17L12C9JPN9 530 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 USP17L21D6R901 530 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 SMIM22K7EJ46 135 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 VWA5AO00534 786 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 KIAA0355O15063 1070 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 MBD4O95243 580 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
HERC3-207ENST00000452979 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
HERC3-207ENST00000452979 RARBP10826 455 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 ITGB8P26012 769 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 STAT3P40763 770 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 KCTD2Q14681 263 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 UBE3CQ15386 1083 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 SLFNL1Q499Z3 407 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 RNF180Q86T96 592 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 SIRT2Q8IXJ6 389 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 REPS2Q8NFH8 660 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 TTYH1Q9H313 450 aaPredicted RBP14.05□□□□□ -0.16
HERC3-207ENST00000452979 ZNF214Q9UL59 606 aaPredicted RBP14.05□□□□□ -0.16
HERC3-207ENST00000452979 CDH23Q9H251 3354 aa14.05□□□□□ -0.16
HERC3-207ENST00000452979 GREB1LQ9C091 1923 aaPredicted RBP14.04□□□□□ -0.16
HERC3-207ENST00000452979 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 HMMRO75330 724 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 PGK2P07205 417 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 MS4A1P11836 297 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 COPB2P35606 906 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 AMOTL1Q8IY63 956 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 MSL3Q8N5Y2 521 aaKnown RBP14.04□□□□□ -0.16
HERC3-207ENST00000452979 HAUS7Q99871 368 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERC3-207ENST00000452979 ZBTB40Q9NUA8 1239 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 FBXO28Q9NVF7 368 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 PPP1R9AQ9ULJ8 1098 aa14.04□□□□□ -0.16
HERC3-207ENST00000452979 VCANP13611 3396 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 SPTBN5Q9NRC6 3674 aaKnown RBP14.03□□□□□ -0.16
HERC3-207ENST00000452979 ADAMTS4O75173 837 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 CLTBP09497 229 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 AKR1A1P14550 325 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 TAL1P17542 331 aaPredicted RBP14.03□□□□□ -0.16
HERC3-207ENST00000452979 CTR9Q6PD62 1173 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 ANKRD33Q7Z3H0 272 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
HERC3-207ENST00000452979 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
HERC3-207ENST00000452979 BOLA2Q9H3K6 86 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
HERC3-207ENST00000452979 TMEM265A0A087WTH1 108 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 A0A1W2PQ45 241 aaPredicted RBP14.02□□□□□ -0.17
HERC3-207ENST00000452979 A0A1W2PQY0 241 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 APBB1O00213 710 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 PGK1P00558 417 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 EPHB4P54760 987 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 MAFAQ8NHW3 353 aaPredicted RBP14.02□□□□□ -0.17
HERC3-207ENST00000452979 DDRGK1Q96HY6 314 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 SLC4A4Q9Y6R1 1079 aa14.02□□□□□ -0.17
HERC3-207ENST00000452979 DNAJC25-GNG10A0A024R161 153 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 CHGBP05060 677 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 ACLYP53396 1101 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 FAAP100Q0VG06 881 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
HERC3-207ENST00000452979 ZSCAN25Q6NSZ9 544 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
HERC3-207ENST00000452979 MAMDC4Q6UXC1 1216 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
HERC3-207ENST00000452979 SYNGAP1Q96PV0 1343 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms