RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 RESP18Q5W5W9 173 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 NUGGCQ68CJ6 796 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC129Q6ZRS4 1044 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CCT6BQ92526 530 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 ARL8AQ96BM9 186 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CENPTQ96BT3 561 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 L3MBTL3Q96JM7 780 aaPredicted RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 C8orf76Q96K31 380 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 OSBPL7Q9BZF2 842 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 YIPF3Q9GZM5 350 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 VCXQ9H320 206 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CNOT10Q9H9A5 744 aaKnown RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 SLC5A4Q9NY91 659 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CLIC4Q9Y696 253 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 EMILIN1Q9Y6C2 1016 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 MRC2Q9UBG0 1479 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CCT8L1PA6NM43 557 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 SSBP05455 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 C7P10643 843 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 TCP1P17987 556 aaKnown RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 NLRP5P59047 1200 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 ITIH4Q14624 930 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 RRP12Q5JTH9 1297 aaKnown RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 ACBD5Q5T8D3 534 aaPredicted RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 HIBCHQ6NVY1 386 aaPredicted RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 G2E3Q7L622 706 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 ARHGAP18Q8N392 663 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 SLC39A7Q92504 469 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 PPP1R14BQ96C90 147 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 FTOQ9C0B1 505 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 STIM2Q9P246 746 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 PCDHA5Q9Y5H7 936 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 MYH15Q9Y2K3 1946 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 FAM83GA6ND36 823 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 LRRC10BA6NIK2 292 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ZSCAN9O15535 394 aaPredicted RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 RNF8O76064 485 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 TRIM37O94972 964 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 NDUFA10O95299 355 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 GSTA2P09210 222 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 GNAT1P11488 350 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 CYLC1P35663 651 aaPredicted RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 SARSP49591 514 aaKnown RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 MXRA7P84157 204 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ITGB3BPQ13352 177 aaPredicted RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 MORC3Q14149 939 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 TMEM132EQ6IEE7 984 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 CPLX4Q7Z7G2 160 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 CHMP7Q8WUX9 453 aaPredicted RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 STAMBPL1Q96FJ0 436 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 IFT74Q96LB3 600 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ZIM3Q96PE6 472 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 TRAPPC9Q96Q05 1148 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 EPAS1Q99814 870 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 TRIM4Q9C037 500 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 RABEP2Q9H5N1 569 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 GOPCQ9HD26 462 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ABHD10Q9NUJ1 306 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ADD3Q9UEY8 706 aaKnown RBP9.32□□□□□ -0.92
SMCO1-202ENST00000452776 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 BLOC1S6Q9UL45 172 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 CARMIL3Q8ND23 1372 aa9.32□□□□□ -0.92
SMCO1-202ENST00000452776 ASAP2O43150 1006 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 WFS1O76024 890 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CTDNEP1O95476 244 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 PENKP01210 267 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 LINGO3P0C6S8 592 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 RANBP1P43487 201 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GUCY1A3Q02108 690 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 PNOCQ13519 176 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ACCSLQ4AC99 568 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 SH2D4BQ5SQS7 431 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 AGBL2Q5U5Z8 902 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GIGYF2Q6Y7W6 1299 aaKnown RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC197Q8NCU1 140 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 LMCD1Q9NZU5 365 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 KCNH3Q9ULD8 1083 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GMEB1Q9Y692 573 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CRB1P82279 1406 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GCOM1H8Y6P7 765 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 MYZAPP0CAP1 466 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 TPP2P29144 1249 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GBP1P32455 592 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ZNF131P52739 623 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CCT2P78371 535 aaKnown RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ATP11AP98196 1134 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms