RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 USP17L21D6R901 530 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 USP2O75604 605 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 SASS6Q6UVJ0 657 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 DNAJC5GQ8N7S2 189 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 ENAHQ8N8S7 591 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 WASF1Q92558 559 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 ZSCAN10Q96SZ4 725 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 SIPA1L1O43166 1804 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 NAV1Q8NEY1 1877 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 ORC4O43929 436 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 KINO60870 393 aaKnown RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 FKBP1BP68106 108 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 TRIM29Q14134 588 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 DEFB115Q30KQ5 88 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 SBK1Q52WX2 424 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 AXDND1Q5T1B0 1012 aaPredicted RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
PKP4-206ENST00000452162 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 USP5P45974 858 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 EVX2Q03828 476 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 SF3A1Q15459 793 aaKnown RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
PKP4-206ENST00000452162 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
PKP4-206ENST00000452162 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 PTPAQ15257 358 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
PKP4-206ENST00000452162 LUZP1Q86V48 1076 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 ARPP21Q9UBL0 812 aaPredicted RBP12.34□□□□□ -0.43
PKP4-206ENST00000452162 ATRNL1Q5VV63 1379 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 PRDM1O75626 825 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 DEXIO95424 95 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 CAVIN2O95810 425 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 MMP1P03956 469 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 NDUFA8P51970 172 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
PKP4-206ENST00000452162 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
PKP4-206ENST00000452162 DDX60LQ5H9U9 1706 aaKnown RBP12.34□□□□□ -0.43
PKP4-206ENST00000452162 ZNF500O60304 480 aaPredicted RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 PTMAP06454 111 aaKnown RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 CYP2D6P10635 497 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 VEGFBP49765 207 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 GRM1Q13255 1194 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 LDLRAD1Q5T700 205 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 CLMNQ96JQ2 1002 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 DNAJC25Q9H1X3 360 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 COL2A1P02458 1487 aaPredicted RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 PPP6R2O75170 966 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 CMA1P23946 247 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 IREB2P48200 963 aaKnown RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 FUT2Q10981 343 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 GNL2Q13823 731 aaKnown RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 STX1AQ16623 288 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 IQCA1Q86XH1 822 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 HHIPL1Q96JK4 782 aa12.33□□□□□ -0.44
PKP4-206ENST00000452162 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
PKP4-206ENST00000452162 FAM196BA6NMK8 535 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 ZNF165P49910 485 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 ZNF157P51786 506 aaPredicted RBP12.32□□□□□ -0.44
PKP4-206ENST00000452162 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.32□□□□□ -0.44
PKP4-206ENST00000452162 NOSTRINQ8IVI9 506 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 HOOK2Q96ED9 719 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 CAPNS2Q96L46 248 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 MYH6P13533 1939 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 DDAH1O94760 285 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 TROAPQ12815 778 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 C11orf57Q6ZUT1 292 aaPredicted RBP12.32□□□□□ -0.44
PKP4-206ENST00000452162 CATIPQ7Z7H3 387 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 DIS3L2Q8IYB7 885 aaKnown RBP12.32□□□□□ -0.44
PKP4-206ENST00000452162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.32□□□□□ -0.44
PKP4-206ENST00000452162 WRNIP1Q96S55 665 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 ZNF341Q9BYN7 854 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 DHX36Q9H2U1 1008 aaKnown RBP12.32□□□□□ -0.44
PKP4-206ENST00000452162 FOXP1Q9H334 677 aaPredicted RBP12.32□□□□□ -0.44
PKP4-206ENST00000452162 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
PKP4-206ENST00000452162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.442e-7■□□□□ 8.8
PKP4-206ENST00000452162 ROBO3Q96MS0 1386 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms