RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 HOXC10Q9NYD6 342 aa13.07□□□□□ -0.32
RPE-214ENST00000452025 NCOR1O75376 2440 aa13.07□□□□□ -0.32
RPE-214ENST00000452025 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
RPE-214ENST00000452025 CYP2D6P10635 497 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 TAL1P17542 331 aaPredicted RBP13.06□□□□□ -0.32
RPE-214ENST00000452025 ICA1Q05084 483 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 TMEM179Q6ZVK1 233 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
RPE-214ENST00000452025 CRNKL1Q9BZJ0 848 aaKnown RBP13.06□□□□□ -0.32
RPE-214ENST00000452025 ZNF576Q9H609 170 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
RPE-214ENST00000452025 TMEM132BQ14DG7 1078 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 GAS2L1Q99501 681 aaPredicted RBP13.05□□□□□ -0.32
RPE-214ENST00000452025 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPE-214ENST00000452025 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 THEGQ9P2T0 379 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 GREB1LQ9C091 1923 aaPredicted RBP13.05□□□□□ -0.32
RPE-214ENST00000452025 CHD9Q3L8U1 2897 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
RPE-214ENST00000452025 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 TCF20Q9UGU0 1960 aaKnown RBP13.04□□□□□ -0.32
RPE-214ENST00000452025 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
RPE-214ENST00000452025 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
RPE-214ENST00000452025 WDR46O15213 610 aaKnown RBP13.04□□□□□ -0.32
RPE-214ENST00000452025 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 AKR1A1P14550 325 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 AKR1B1P15121 316 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 PDE6AP16499 860 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 FAAP100Q0VG06 881 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 DYNLL2Q96FJ2 89 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 TINF2Q9BSI4 451 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 FBXO28Q9NVF7 368 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 NRBP1Q9UHY1 535 aa13.04□□□□□ -0.32
RPE-214ENST00000452025 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 APBB1O00213 710 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 SLC25A27O95847 323 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 PBX2P40425 430 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 KCTD2Q14681 263 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 AACSQ86V21 672 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 ZHX1Q9UKY1 873 aaPredicted RBP13.03□□□□□ -0.32
RPE-214ENST00000452025 CNPY2Q9Y2B0 182 aa13.03□□□□□ -0.32
RPE-214ENST00000452025 MYADML2A6NDP7 307 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 GRXCR1A8MXD5 290 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 RAD21O60216 631 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 ZNF865P0CJ78 1059 aaPredicted RBP13.02□□□□□ -0.33
RPE-214ENST00000452025 ACLYP53396 1101 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 RIOX2Q8IUF8 465 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 ADAMTS19Q8TE59 1207 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 PBX4Q9BYU1 374 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.33
RPE-214ENST00000452025 SWAP70Q9UH65 585 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 TBX21Q9UL17 535 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.33
RPE-214ENST00000452025 TMX2Q9Y320 296 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 ZNF532Q9HCE3 1301 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
RPE-214ENST00000452025 TIMP1P01033 207 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
RPE-214ENST00000452025 PPIGQ13427 754 aaKnown RBP eCLIP13.01□□□□□ -0.338e-7■■□□□ 12.7
RPE-214ENST00000452025 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
RPE-214ENST00000452025 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 NUP133Q8WUM0 1156 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 UHRF1Q96T88 793 aaPredicted RBP13.01□□□□□ -0.33
RPE-214ENST00000452025 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
RPE-214ENST00000452025 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 ARMT1Q9H993 441 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
RPE-214ENST00000452025 MROH7Q68CQ1 1323 aa13□□□□□ -0.33
RPE-214ENST00000452025 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
RPE-214ENST00000452025 MOXD2PA6NHM9 499 aa13□□□□□ -0.33
RPE-214ENST00000452025 SMIM22K7EJ46 135 aa13□□□□□ -0.33
RPE-214ENST00000452025 CSF2RAP15509 400 aa13□□□□□ -0.33
RPE-214ENST00000452025 TTF1Q15361 905 aaPredicted RBP13□□□□□ -0.33
RPE-214ENST00000452025 CCDC85BQ15834 202 aaPredicted RBP13□□□□□ -0.33
RPE-214ENST00000452025 KCNA10Q16322 511 aa13□□□□□ -0.33
RPE-214ENST00000452025 TMEM240Q5SV17 173 aa13□□□□□ -0.33
RPE-214ENST00000452025 FAM83BQ5T0W9 1011 aa13□□□□□ -0.33
RPE-214ENST00000452025 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
RPE-214ENST00000452025 MFSD5Q6N075 450 aa13□□□□□ -0.33
RPE-214ENST00000452025 CCDC174Q6PII3 467 aa13□□□□□ -0.33
RPE-214ENST00000452025 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
RPE-214ENST00000452025 FTSJ3Q8IY81 847 aaKnown RBP13□□□□□ -0.33
RPE-214ENST00000452025 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
RPE-214ENST00000452025 TOX2Q96NM4 488 aa13□□□□□ -0.33
RPE-214ENST00000452025 TSEN34Q9BSV6 310 aaKnown RBP13□□□□□ -0.33
RPE-214ENST00000452025 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms