RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 A0A1W2PRG0 241 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 H3BQV1 296 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 SCG2P13521 617 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 MARCKSP29966 332 aaPredicted RBP7.61□□□□□ -1.19
USP46-202ENST00000451218 DPYDQ12882 1025 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 IFFO2Q5TF58 517 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 PDXDC2PQ6P474 469 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 MTMR14Q8NCE2 650 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 GPKOWQ92917 476 aaPredicted RBP eCLIP7.61□□□□□ -1.19
USP46-202ENST00000451218 TEPSINQ96N21 525 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 SRPRBQ9Y5M8 271 aaKnown RBP7.61□□□□□ -1.19
USP46-202ENST00000451218 C21orf2O43822 256 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 CDKL5O76039 1030 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 CCDC173Q0VFZ6 552 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 CERS3Q8IU89 383 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 EYA3Q99504 573 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 BPIFA3Q9BQP9 254 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 NUP62CLQ9H1M0 184 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 SH3GLB2Q9NR46 395 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 FAM196BA6NMK8 535 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 GOLGA8HP0CJ92 632 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 HMGB2P26583 209 aaKnown RBP7.61□□□□□ -1.19
USP46-202ENST00000451218 SMARCA1P28370 1054 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 ANO6Q4KMQ2 910 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 KCNG4Q8TDN1 519 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 MRPS27Q92552 414 aaKnown RBP7.61□□□□□ -1.19
USP46-202ENST00000451218 TIGD1Q96MW7 591 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 UBAC1Q9BSL1 405 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 TMEM60Q9H2L4 133 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 ZNF202O95125 648 aa7.61□□□□□ -1.19
USP46-202ENST00000451218 NCLP19338 710 aaKnown RBP7.61□□□□□ -1.19
USP46-202ENST00000451218 C1QBPQ07021 282 aaKnown RBP7.61□□□□□ -1.19
USP46-202ENST00000451218 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 CSRNP2Q9H175 543 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.6□□□□□ -1.19
USP46-202ENST00000451218 KIAA1217Q5T5P2 1943 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 PHF20L1A8MW92 1017 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 H0YIN7 160 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 PSMD14O00487 310 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 CALM1P0DP23 149 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 CALM2P0DP24 149 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 CALM3P0DP25 149 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 SPECC1Q5M775 1068 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 SARM1Q6SZW1 724 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 NFXL1Q6ZNB6 911 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 FSIP1Q8NA03 581 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 MMTAG2Q9BU76 263 aaKnown RBP7.6□□□□□ -1.19
USP46-202ENST00000451218 KIAA1468Q9P260 1216 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 F8W031 263 aaPredicted RBP7.6□□□□□ -1.19
USP46-202ENST00000451218 BAG3O95817 575 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 MAP3K11Q16584 847 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 CCDC144BQ3MJ40 725 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 FAM43AQ8N2R8 423 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 RASGRP4Q8TDF6 673 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 DNAJC25Q9H1X3 360 aa7.6□□□□□ -1.19
USP46-202ENST00000451218 NOL7Q9UMY1 257 aaKnown RBP7.6□□□□□ -1.19
USP46-202ENST00000451218 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 USP5P45974 858 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 NUP133Q8WUM0 1156 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 EPSTI1Q96J88 318 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 JMJD4Q9H9V9 463 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 USP40Q9NVE5 1235 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 USP25Q9UHP3 1055 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 TSPY2A6NKD2 308 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 RIOK3O14730 519 aaKnown RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 LETM1O95202 739 aaPredicted RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 FGD1P98174 961 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 TTBK2Q6IQ55 1244 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 CATIPQ7Z7H3 387 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 IQCA1Q86XH1 822 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 KIAA0825Q8IV33 1275 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 FAM200AQ8TCP9 573 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 CABP5Q9NP86 173 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 LOXHD1Q8IVV2 1947 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 ASTN2O75129 1339 aaPredicted RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 CD44P16070 742 aaKnown RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 ZNF543Q08ER8 600 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 HS1BP3Q53T59 392 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 GRAMD1CQ8IYS0 662 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 ZNF396Q96N95 335 aaPredicted RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 CUTAO60888 179 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 TAL1P17542 331 aaPredicted RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 RSBN1LQ6PCB5 846 aaPredicted RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 MTMR9Q96QG7 549 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 ZC3H12CQ9C0D7 883 aaKnown RBP7.59□□□□□ -1.19
USP46-202ENST00000451218 PCDHA4Q9UN74 947 aa7.59□□□□□ -1.19
USP46-202ENST00000451218 LTBP3Q9NS15 1303 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 CPLX1O14810 134 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 FMR1Q06787 632 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP46-202ENST00000451218 PNOCQ13519 176 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 KRBA2Q6ZNG9 492 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 CNKSR1Q969H4 720 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 ZNF622Q969S3 477 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP46-202ENST00000451218 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
USP46-202ENST00000451218 STK32BQ9NY57 414 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 NKRFO15226 690 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP46-202ENST00000451218 LDHCP07864 332 aa7.58□□□□□ -1.2
USP46-202ENST00000451218 MMP14P50281 582 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms