RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SHHQ15465 462 aa20.97■□□□□ 0.95
FAM3A-216ENST00000449971 C9orf50Q5SZB4 431 aa20.97■□□□□ 0.95
FAM3A-216ENST00000449971 CATSPERGQ6ZRH7 1159 aa20.97■□□□□ 0.95
FAM3A-216ENST00000449971 SMC5Q8IY18 1101 aa20.97■□□□□ 0.95
FAM3A-216ENST00000449971 TRPV1Q8NER1 839 aa20.97■□□□□ 0.95
FAM3A-216ENST00000449971 MSCO60682 206 aa20.96■□□□□ 0.95
FAM3A-216ENST00000449971 GNAT2P19087 354 aa20.96■□□□□ 0.95
FAM3A-216ENST00000449971 USP14P54578 494 aa20.96■□□□□ 0.95
FAM3A-216ENST00000449971 DPP9Q86TI2 863 aa20.96■□□□□ 0.95
FAM3A-216ENST00000449971 MAFAQ8NHW3 353 aaPredicted RBP20.96■□□□□ 0.95
FAM3A-216ENST00000449971 SEC62Q99442 399 aaKnown RBP20.96■□□□□ 0.95
FAM3A-216ENST00000449971 KIAA1683Q9H0B3 1180 aa20.96■□□□□ 0.95
FAM3A-216ENST00000449971 RPAP3Q9H6T3 665 aaPredicted RBP20.96■□□□□ 0.95
FAM3A-216ENST00000449971 ARPP21Q9UBL0 812 aaPredicted RBP20.96■□□□□ 0.95
FAM3A-216ENST00000449971 NAV1Q8NEY1 1877 aa20.96■□□□□ 0.95
FAM3A-216ENST00000449971 MINDY4BA8MYZ0 360 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 KBTBD13C9JR72 458 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 AKR1B1P15121 316 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 IRX6P78412 446 aaPredicted RBP20.95■□□□□ 0.94
FAM3A-216ENST00000449971 GRB14Q14449 540 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 GIMAP6Q6P9H5 292 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 TMEM179Q6ZVK1 233 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 C16orf86Q6ZW13 317 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 MYLIPQ8WY64 445 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 EVI5LQ96CN4 794 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 C12orf42Q96LP6 360 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 CCDC17Q96LX7 622 aa20.95■□□□□ 0.94
FAM3A-216ENST00000449971 PATL2C9JE40 543 aaKnown RBP20.94■□□□□ 0.94
FAM3A-216ENST00000449971 TDO2P48775 406 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 TRIM60Q495X7 471 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 SBK1Q52WX2 424 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 ZMYM1Q5SVZ6 1142 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 SAMD1Q6SPF0 538 aaPredicted RBP20.94■□□□□ 0.94
FAM3A-216ENST00000449971 CHD1LQ86WJ1 897 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 STK11IPQ8N1F8 1099 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 BADQ92934 168 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 FERMT2Q96AC1 680 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 SEMA6BQ9H3T3 888 aa20.94■□□□□ 0.94
FAM3A-216ENST00000449971 SPDYE16A6NNV3 312 aaPredicted RBP20.93■□□□□ 0.94
FAM3A-216ENST00000449971 SLC39A5Q6ZMH5 540 aa20.93■□□□□ 0.94
FAM3A-216ENST00000449971 ARRDC4Q8NCT1 418 aa20.93■□□□□ 0.94
FAM3A-216ENST00000449971 A0A1W2PRG0 241 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 CYBAP13498 195 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 ADORA2AP29274 412 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 NUCB1Q02818 461 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 PRAMEF19Q5SWL8 479 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 NACAP1Q9BZK3 213 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 MKNK2Q9HBH9 465 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 EPB41L4AQ9HCS5 686 aaPredicted RBP20.92■□□□□ 0.94
FAM3A-216ENST00000449971 CDH23Q9H251 3354 aa20.92■□□□□ 0.94
FAM3A-216ENST00000449971 HOXC6P09630 235 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 MYH7P12883 1935 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 PLS1Q14651 629 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 CLEC10AQ8IUN9 316 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 IFNL3Q8IZI9 196 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 TANGO6Q9C0B7 1094 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 ARHGEF10LQ9HCE6 1279 aa20.91■□□□□ 0.94
FAM3A-216ENST00000449971 TRIM6-TRIM34B2RNG4 842 aa20.9■□□□□ 0.94
FAM3A-216ENST00000449971 ADCYAP1R1P41586 468 aa20.9■□□□□ 0.94
FAM3A-216ENST00000449971 ICA1Q05084 483 aa20.9■□□□□ 0.94
FAM3A-216ENST00000449971 SH3RF1Q7Z6J0 888 aa20.9■□□□□ 0.94
FAM3A-216ENST00000449971 MOV10L1Q9BXT6 1211 aaKnown RBP20.9■□□□□ 0.94
FAM3A-216ENST00000449971 FOSL2P15408 326 aa20.89■□□□□ 0.93
FAM3A-216ENST00000449971 CCDC129Q6ZRS4 1044 aa20.89■□□□□ 0.93
FAM3A-216ENST00000449971 SIAH1Q8IUQ4 282 aa20.89■□□□□ 0.93
FAM3A-216ENST00000449971 RILPL2Q969X0 211 aa20.89■□□□□ 0.93
FAM3A-216ENST00000449971 TTYH1Q9H313 450 aaPredicted RBP20.89■□□□□ 0.93
FAM3A-216ENST00000449971 SPTBN5Q9NRC6 3674 aaKnown RBP20.89■□□□□ 0.93
FAM3A-216ENST00000449971 LTBP2Q14767 1821 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 ERCC3P19447 782 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 LBX2Q6XYB7 198 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 NCAPG2Q86XI2 1143 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 PLEKHM2Q8IWE5 1019 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 NAPBQ9H115 298 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 SH2D4AQ9H788 454 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 KANSL2Q9H9L4 492 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 PDLIM7Q9NR12 457 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 TMX2Q9Y320 296 aa20.88■□□□□ 0.93
FAM3A-216ENST00000449971 BAZ2AQ9UIF9 1905 aaKnown RBP20.88■□□□□ 0.93
FAM3A-216ENST00000449971 TRIM43BA6NCK2 446 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 SEPT4O43236 478 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 COBLO75128 1261 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
FAM3A-216ENST00000449971 RASA1P20936 1047 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 FAM47AQ5JRC9 791 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 OLFML2BQ68BL8 750 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 TRIM43Q96BQ3 446 aaPredicted RBP20.87■□□□□ 0.93
FAM3A-216ENST00000449971 SPATC1LQ9H0A9 340 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 ZNF287Q9HBT7 754 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 HELLSQ9NRZ9 838 aa20.87■□□□□ 0.93
FAM3A-216ENST00000449971 PRDM1O75626 825 aa20.86■□□□□ 0.93
FAM3A-216ENST00000449971 COG2Q14746 738 aa20.86■□□□□ 0.93
FAM3A-216ENST00000449971 LRRC41Q15345 812 aa20.86■□□□□ 0.93
FAM3A-216ENST00000449971 KIAA1755Q5JYT7 1200 aa20.86■□□□□ 0.93
FAM3A-216ENST00000449971 ZNF444Q8N0Y2 327 aaPredicted RBP20.86■□□□□ 0.93
FAM3A-216ENST00000449971 SPICE1Q8N0Z3 855 aa20.86■□□□□ 0.93
FAM3A-216ENST00000449971 RNPC3Q96LT9 517 aaKnown RBP20.86■□□□□ 0.93
FAM3A-216ENST00000449971 RLFQ13129 1914 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 RAD21O60216 631 aa20.85■□□□□ 0.93
FAM3A-216ENST00000449971 SLC3A2P08195 630 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms