RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MYL10Q9BUA6 226 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 LY9Q9HBG7 655 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 TMEM67Q5HYA8 995 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 FAM83BQ5T0W9 1011 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
CCDC171-203ENST00000449575 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-203ENST00000449575 C12orf42Q96LP6 360 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 RPAP3Q9H6T3 665 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-203ENST00000449575 RNF186Q9NXI6 227 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 SH2B2O14492 632 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-203ENST00000449575 TBC1D8O95759 1140 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 TOP1P11387 765 aaKnown RBP11.52□□□□□ -0.57
CCDC171-203ENST00000449575 SREBF2Q12772 1141 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 KRT32Q14532 448 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.57
CCDC171-203ENST00000449575 KCTD1Q719H9 257 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 DGKHQ86XP1 1220 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
CCDC171-203ENST00000449575 FRMPD2Q68DX3 1309 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-203ENST00000449575 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 RXRAP19793 462 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 RPS6KB1P23443 525 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 USP14P54578 494 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 BLOC1S2Q6QNY1 142 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 FASTKD5Q7L8L6 764 aaKnown RBP11.51□□□□□ -0.57
CCDC171-203ENST00000449575 JMYQ8N9B5 988 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 TTC14Q96N46 770 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 GZF1Q9H116 711 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-203ENST00000449575 ASCC2Q9H1I8 757 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-203ENST00000449575 BRCA2P51587 3418 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 CRHR2Q13324 411 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 WTAPQ15007 396 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 TTBK2Q6IQ55 1244 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 RUFY3Q7L099 469 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 GMCL1P1Q8NEA9 526 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 WBP1LQ9NX94 342 aa11.51□□□□□ -0.57
CCDC171-203ENST00000449575 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
CCDC171-203ENST00000449575 PDHBP11177 359 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 INHBEP58166 350 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 TAF1CQ15572 869 aaPredicted RBP11.5□□□□□ -0.57
CCDC171-203ENST00000449575 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 Q6ZUG5 572 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 MTERF4Q7Z6M4 381 aaKnown RBP11.5□□□□□ -0.57
CCDC171-203ENST00000449575 P2RX7Q99572 595 aaKnown RBP11.5□□□□□ -0.57
CCDC171-203ENST00000449575 TANGO6Q9C0B7 1094 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 KAT14Q9H8E8 782 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 RBM25P49756 843 aaKnown RBP11.5□□□□□ -0.57
CCDC171-203ENST00000449575 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.5□□□□□ -0.57
CCDC171-203ENST00000449575 STAG2Q8N3U4 1231 aa11.5□□□□□ -0.57
CCDC171-203ENST00000449575 MGAMO43451 1857 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 A0A0U1RQG5 324 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-203ENST00000449575 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-203ENST00000449575 SLC16A2P36021 539 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 ANAPC15P60006 121 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 CAP1Q01518 475 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 TOB2Q14106 344 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-203ENST00000449575 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-203ENST00000449575 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 LPAR1Q92633 364 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 BRF1Q92994 677 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 IL17RAQ96F46 866 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 TMEM87BQ96K49 555 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 ERICH2A1L162 156 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
CCDC171-203ENST00000449575 SLC1A4P43007 532 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 SNAP25P60880 206 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 APOBRQ0VD83 1088 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 TROAPQ12815 778 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 TXNRD2Q9NNW7 524 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 CPA4Q9UI42 421 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 PRDM4Q9UKN5 801 aa11.49□□□□□ -0.57
CCDC171-203ENST00000449575 ADGRA2Q96PE1 1338 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L15C9J2P7 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L13C9JLJ4 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L11C9JVI0 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L18D6R9N7 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L22D6RA61 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L17D6RBQ6 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L19D6RCP7 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 USP17L20D6RJB6 530 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 DTNBO60941 627 aa11.48□□□□□ -0.57
CCDC171-203ENST00000449575 FLOT1O75955 427 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms