RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 RPN1P04843 607 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 HARSP12081 509 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 GALNT17Q6IS24 598 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 C10orf67Q8IYJ2 551 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 MYOCDQ8IZQ8 938 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 IPO4Q8TEX9 1081 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 TEKT1Q969V4 418 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 IQCDQ96DY2 449 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 EEF2KMTQ96G04 330 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 DDX39AO00148 427 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 IKBKBO14920 756 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 LONP1P36776 959 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 NR5A1Q13285 461 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 FBF1Q8TES7 1133 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 TTC14Q96N46 770 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 AIFM3Q96NN9 605 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 FRMPD2Q68DX3 1309 aaPredicted RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 GOLGA6CA6NDK9 693 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 SH2B2O14492 632 aaPredicted RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 GOLGA6DP0CG33 693 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 OAS2P29728 719 aaKnown RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 CDC25BP30305 580 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 DYNLL1P63167 89 aaKnown RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 WDR44Q5JSH3 913 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 SND1Q7KZF4 910 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTC1-202ENST00000449476 KLHL7Q8IXQ5 586 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 KIFAP3Q92845 792 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 CCDC114Q96M63 670 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 GOLGA6AQ9NYA3 693 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 GOLGA6BA6NDN3 693 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 H0YIN7 160 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 ERCC5P28715 1186 aaPredicted RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 BTDP43251 543 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 RPS6KA1Q15418 735 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 LCORLQ8N3X6 602 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 TRIM31Q9BZY9 425 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 PSTPIP2Q9H939 334 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 ACTN4O43707 911 aaKnown RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 KCNK9Q9NPC2 374 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTC1-202ENST00000449476 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 MYCLP12524 364 aaPredicted RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 TOB2Q14106 344 aaPredicted RBP11.55□□□□□ -0.56
CTC1-202ENST00000449476 RPGRIP1Q96KN7 1286 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 GDAP1L1Q96MZ0 367 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 CTTNBP2NLQ9P2B4 639 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 USP21Q9UK80 565 aa11.55□□□□□ -0.56
CTC1-202ENST00000449476 EFCAB8A8MWE9 144 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 NDUFAB1O14561 156 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 NF2P35240 595 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 GPBP1Q86WP2 473 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 KDM3AQ9Y4C1 1321 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 MMP1P03956 469 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 LIFRP42702 1097 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 TRAPPC10P48553 1259 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 BRD3Q15059 726 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 PIGBQ92521 554 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 LRRC45Q96CN5 670 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 SLC39A2Q9NP94 309 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 SEMA3EO15041 775 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 TPH2Q8IWU9 490 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 TRIM58Q8NG06 486 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
CTC1-202ENST00000449476 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
CTC1-202ENST00000449476 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 COPB1P53618 953 aaKnown RBP11.54□□□□□ -0.56
CTC1-202ENST00000449476 PAK2Q13177 524 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 PEX26Q7Z412 305 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 EXOC7Q9UPT5 735 aa11.54□□□□□ -0.56
CTC1-202ENST00000449476 GNA14O95837 355 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 CASP14P31944 242 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 GRAMD1CQ8IYS0 662 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 UBL4BQ8N7F7 174 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 IFT74Q96LB3 600 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 UTP11Q9Y3A2 253 aaKnown RBP11.53□□□□□ -0.56
CTC1-202ENST00000449476 ERVV-1B6SEH8 477 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 RASGRF1Q13972 1273 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 C6orf163Q5TEZ5 329 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 MSL1Q68DK7 614 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 DAAM2Q86T65 1068 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 RDH13Q8NBN7 331 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms