RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HSPD1P10809 573 aaKnown RBP17.3■□□□□ 0.36
USP39-206ENST00000448971 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
USP39-206ENST00000448971 RASA1P20936 1047 aa17.3■□□□□ 0.36
USP39-206ENST00000448971 GPRC5AQ8NFJ5 357 aa17.3■□□□□ 0.36
USP39-206ENST00000448971 C12orf42Q96LP6 360 aa17.3■□□□□ 0.36
USP39-206ENST00000448971 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
USP39-206ENST00000448971 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
USP39-206ENST00000448971 PFASO15067 1338 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 ZMYM6O95789 1325 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 COL6A1P12109 1028 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 SYN1P17600 705 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 VCAM1P19320 739 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 MAGEA10P43363 369 aaPredicted RBP17.29■□□□□ 0.36
USP39-206ENST00000448971 CTDSPL2Q05D32 466 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 LRIT3Q3SXY7 679 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 LHX8Q68G74 356 aa17.29■□□□□ 0.36
USP39-206ENST00000448971 ZNF444Q8N0Y2 327 aaPredicted RBP17.29■□□□□ 0.36
USP39-206ENST00000448971 RAD50Q92878 1312 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 TSPY3P0CV98 308 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 TSPY8P0CW00 308 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
USP39-206ENST00000448971 MORN1Q5T089 497 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 PORCNQ9H237 461 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 KANSL2Q9H9L4 492 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
USP39-206ENST00000448971 UNC80Q8N2C7 3258 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
USP39-206ENST00000448971 A0A1W2PRG0 241 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 RAD21O60216 631 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
USP39-206ENST00000448971 MAPK4P31152 587 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 ERVK-9P63128 1117 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 ERVK-24P63145 666 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 ALX1Q15699 326 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 SKAP1Q86WV1 359 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 TRMT44Q8IYL2 757 aaKnown RBP17.27■□□□□ 0.36
USP39-206ENST00000448971 RUFY2Q8WXA3 655 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
USP39-206ENST00000448971 PLIN4Q96Q06 1357 aa17.27■□□□□ 0.35
USP39-206ENST00000448971 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 FGAP02671 866 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 HAND2P61296 217 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 CCL14Q16627 93 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 GPR142Q7Z601 462 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 TDHQ8IZJ6 230 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 DEFB123Q8N688 67 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 RPAP3Q9H6T3 665 aaPredicted RBP17.26■□□□□ 0.35
USP39-206ENST00000448971 TMX2Q9Y320 296 aa17.26■□□□□ 0.35
USP39-206ENST00000448971 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
USP39-206ENST00000448971 FAM47AQ5JRC9 791 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 Q7L0L9 218 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 LPAR1Q92633 364 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 GOPCQ9HD26 462 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
USP39-206ENST00000448971 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
USP39-206ENST00000448971 RANBP6O60518 1105 aaKnown RBP17.24■□□□□ 0.35
USP39-206ENST00000448971 CNMDO75829 334 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
USP39-206ENST00000448971 CHMLP26374 656 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 TFAP4Q01664 338 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
USP39-206ENST00000448971 PLEKHH3Q7Z736 793 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 GTF3C2Q8WUA4 911 aaPredicted RBP17.24■□□□□ 0.35
USP39-206ENST00000448971 DSCC1Q9BVC3 393 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP39-206ENST00000448971 IL25Q9H293 177 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
USP39-206ENST00000448971 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
USP39-206ENST00000448971 RGS2P41220 211 aa17.23■□□□□ 0.35
USP39-206ENST00000448971 LRRC26Q2I0M4 334 aa17.23■□□□□ 0.35
USP39-206ENST00000448971 CATSPERGQ6ZRH7 1159 aa17.23■□□□□ 0.35
USP39-206ENST00000448971 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
USP39-206ENST00000448971 UBE2OQ9C0C9 1292 aaKnown RBP17.23■□□□□ 0.35
USP39-206ENST00000448971 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
USP39-206ENST00000448971 RABGAP1Q9Y3P9 1069 aa17.23■□□□□ 0.35
USP39-206ENST00000448971 IGKV6D-41A0A0C4DH26 115 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 ZNF213O14771 459 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 TTLL1O95922 423 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 IMMTQ16891 758 aaKnown RBP17.22■□□□□ 0.35
USP39-206ENST00000448971 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
USP39-206ENST00000448971 NEDD1Q8NHV4 660 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
USP39-206ENST00000448971 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
USP39-206ENST00000448971 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms