RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 RASA1P20936 1047 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 KCNA3P22001 575 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 SMARCA1P28370 1054 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 KIF5BP33176 963 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 NASPP49321 788 aaPredicted RBP8.01□□□□□ -1.13
RFC4-209ENST00000448497 MMP14P50281 582 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 KIF23Q02241 960 aaPredicted RBP8.01□□□□□ -1.13
RFC4-209ENST00000448497 GABPAQ06546 454 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 CCDC93Q567U6 631 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 CCDC183Q5T5S1 534 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 KRT40Q6A162 431 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 APOBEC3HQ6NTF7 200 aaKnown RBP8.01□□□□□ -1.13
RFC4-209ENST00000448497 LRSAM1Q6UWE0 723 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 NYAP1Q6ZVC0 841 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 SPNS2Q8IVW8 549 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 ZKSCAN3Q9BRR0 538 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 PRR14Q9BWN1 585 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 IDI2Q9BXS1 227 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 EHD4Q9H223 541 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 SWAP70Q9UH65 585 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 SERPINA10Q9UK55 444 aa8.01□□□□□ -1.13
RFC4-209ENST00000448497 TTF2Q9UNY4 1162 aaKnown RBP8.01□□□□□ -1.13
RFC4-209ENST00000448497 A0A1W2PQ27 194 aa8□□□□□ -1.13
RFC4-209ENST00000448497 A0A1W2PQ64 194 aa8□□□□□ -1.13
RFC4-209ENST00000448497 A0A1W2PQD8 194 aa8□□□□□ -1.13
RFC4-209ENST00000448497 TSPY2A6NKD2 308 aa8□□□□□ -1.13
RFC4-209ENST00000448497 DTNBO60941 627 aa8□□□□□ -1.13
RFC4-209ENST00000448497 RNF40O75150 1001 aa8□□□□□ -1.13
RFC4-209ENST00000448497 PRDM1O75626 825 aa8□□□□□ -1.13
RFC4-209ENST00000448497 POLR3DP05423 398 aaPredicted RBP8□□□□□ -1.13
RFC4-209ENST00000448497 CD46P15529 392 aa8□□□□□ -1.13
RFC4-209ENST00000448497 CDK8P49336 464 aa8□□□□□ -1.13
RFC4-209ENST00000448497 GNAQP50148 359 aa8□□□□□ -1.13
RFC4-209ENST00000448497 PLCD1P51178 756 aa8□□□□□ -1.13
RFC4-209ENST00000448497 TFAP4Q01664 338 aa8□□□□□ -1.13
RFC4-209ENST00000448497 TRIM29Q14134 588 aa8□□□□□ -1.13
RFC4-209ENST00000448497 FOXD4L6Q3SYB3 417 aaPredicted RBP8□□□□□ -1.13
RFC4-209ENST00000448497 MYSM1Q5VVJ2 828 aa8□□□□□ -1.13
RFC4-209ENST00000448497 FAM173BQ6P4H8 233 aa8□□□□□ -1.13
RFC4-209ENST00000448497 FOXD4L3Q6VB84 417 aaPredicted RBP8□□□□□ -1.13
RFC4-209ENST00000448497 THSD4Q6ZMP0 1018 aa8□□□□□ -1.13
RFC4-209ENST00000448497 TMTC3Q6ZXV5 915 aa8□□□□□ -1.13
RFC4-209ENST00000448497 GAS2L3Q86XJ1 694 aa8□□□□□ -1.13
RFC4-209ENST00000448497 MAPKAPK5Q8IW41 473 aa8□□□□□ -1.13
RFC4-209ENST00000448497 ZNF444Q8N0Y2 327 aaPredicted RBP8□□□□□ -1.13
RFC4-209ENST00000448497 PHKBQ93100 1093 aa8□□□□□ -1.13
RFC4-209ENST00000448497 LZTS2Q9BRK4 669 aa8□□□□□ -1.13
RFC4-209ENST00000448497 MYL10Q9BUA6 226 aa8□□□□□ -1.13
RFC4-209ENST00000448497 SLC26A6Q9BXS9 759 aa8□□□□□ -1.13
RFC4-209ENST00000448497 DHX36Q9H2U1 1008 aaKnown RBP8□□□□□ -1.13
RFC4-209ENST00000448497 FOXP1Q9H334 677 aaPredicted RBP8□□□□□ -1.13
RFC4-209ENST00000448497 GRPEL1Q9HAV7 217 aa8□□□□□ -1.13
RFC4-209ENST00000448497 MKNK2Q9HBH9 465 aa8□□□□□ -1.13
RFC4-209ENST00000448497 GPBP1L1Q9HC44 474 aaPredicted RBP8□□□□□ -1.13
RFC4-209ENST00000448497 IL17RBQ9NRM6 502 aa8□□□□□ -1.13
RFC4-209ENST00000448497 DDX19AQ9NUU7 478 aaKnown RBP8□□□□□ -1.13
RFC4-209ENST00000448497 TSR3Q9UJK0 312 aaKnown RBP8□□□□□ -1.13
RFC4-209ENST00000448497 ATRNL1Q5VV63 1379 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 MMP1P03956 469 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 TSPY3P0CV98 308 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 TSPY8P0CW00 308 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 XRCC6P12956 609 aaKnown RBP eCLIP7.99□□□□□ -1.13
RFC4-209ENST00000448497 XBP1P17861 261 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 RXRAP19793 462 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 CRKP46108 304 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 GRM4Q14833 912 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 PKN1Q16512 942 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 ADALQ6DHV7 355 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 CDC42EP5Q6NZY7 148 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 RBM43Q6ZSC3 357 aaKnown RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 METTL16Q86W50 562 aaKnown RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 RAB11FIP4Q86YS3 637 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 RDH13Q8NBN7 331 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 LINC00301Q8NCQ3 95 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 CTCFLQ8NI51 663 aaPredicted RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 KCNG4Q8TDN1 519 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 PGBD1Q96JS3 809 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 USP28Q96RU2 1077 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 PDGFDQ9GZP0 370 aaPredicted RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 MTFR1LQ9H019 292 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 OSBPL5Q9H0X9 879 aaPredicted RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 KAT14Q9H8E8 782 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 DBNDD1Q9H9R9 158 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 SH3GLB2Q9NR46 395 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 TFIP11Q9UBB9 837 aaKnown RBP7.99□□□□□ -1.13
RFC4-209ENST00000448497 CNTNAP5Q8WYK1 1306 aa7.99□□□□□ -1.13
RFC4-209ENST00000448497 BAZ2BQ9UIF8 2168 aaKnown RBP7.98□□□□□ -1.13
RFC4-209ENST00000448497 IGKV6D-41A0A0C4DH26 115 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 KIF28PB7ZC32 967 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 C21orf2O43822 256 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 ENTPD3O75355 529 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 VIL1P09327 827 aaKnown RBP7.98□□□□□ -1.13
RFC4-209ENST00000448497 DPEP1P16444 411 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 AKAP17AQ02040 695 aaKnown RBP7.98□□□□□ -1.13
RFC4-209ENST00000448497 GUCY1B3Q02153 619 aa7.98□□□□□ -1.13
RFC4-209ENST00000448497 SLC39A14Q15043 492 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms