RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 THOC1Q96FV9 657 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 LACRTQ9GZZ8 138 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 LIMA1Q9UHB6 759 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ANKRD33BA6NCL7 494 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ANTXR2P58335 489 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ICA1Q05084 483 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 RBBP5Q15291 538 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ANKRD20A8PQ5CZ79 823 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 PALLDQ8WX93 1383 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ZNF233A6NK53 670 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 RNF113AO15541 343 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 CYLC1P35663 651 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 NEXNQ0ZGT2 675 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 SAFBQ15424 915 aaKnown RBP eCLIP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 SPRED3Q2MJR0 410 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 MSL1Q68DK7 614 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 CREG2Q8IUH2 290 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 NOSTRINQ8IVI9 506 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 NSMCE1Q8WV22 266 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ENO4A6NNW6 628 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PPP1R3GB7ZBB8 358 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 SCTRP47872 440 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 RWDD2BP57060 319 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PTPN12Q05209 780 aaKnown RBP10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 MYO1EQ12965 1108 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 KCNB1Q14721 858 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 NBPF9Q3BBW0 867 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 C8orf74Q6P047 294 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 IQCKQ8N0W5 287 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 CCDC26Q8TAB7 109 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 ATP6V1G3Q96LB4 118 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 SNX12Q9UMY4 172 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 DUSP10Q9Y6W6 482 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 USP6P35125 1406 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 GMNCA6NCL1 334 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 BTBD18B2RXH4 712 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 M0R2C6 588 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 MICU3Q86XE3 530 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 ARFGAP2Q8N6H7 521 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PARD3BQ8TEW8 1205 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 ZBTB10Q96DT7 871 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 NOD2Q9HC29 1040 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 FMN2Q9NZ56 1722 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 LRRC10BA6NIK2 292 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 IGKV5-2P06315 115 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 KIF5AQ12840 1032 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PPP4R3AQ6IN85 833 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 MICAL1Q8TDZ2 1067 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 NOC3LQ8WTT2 800 aaKnown RBP10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 RIMBP3CA6NJZ7 1639 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 RIMBP3BA6NNM3 1639 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 RIMBP3Q9UFD9 1639 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 RCCD1A6NED2 376 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 KCNJ18B7U540 433 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 AP1G2O75843 785 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 METP08581 1390 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PDE6BP35913 854 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PAFAH1B1P43034 410 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PIP4K2AP48426 406 aaPredicted RBP10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 XRCC4Q13426 336 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 KCNJ12Q14500 433 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 WASHC4Q2M389 1173 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 EMC10Q5UCC4 262 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 MAATS1Q7Z4T9 603 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 IFT81Q8WYA0 676 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 PSMB7Q99436 277 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 CSRNP2Q9H175 543 aa10.5□□□□□ -0.73
SYNPO2-204ENST00000448416 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 WDR17Q8IZU2 1322 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 GOLGA6L10A6NI86 522 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 SRRM3A6NNA2 597 aaPredicted RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 HMGB1P1B2RPK0 211 aaPredicted RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 MGRN1O60291 552 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 FGAP02671 866 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 TOB1P50616 345 aaPredicted RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 GLE1Q53GS7 698 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 RRAGBQ5VZM2 374 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 CAPRIN2Q6IMN6 1127 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 HIBCHQ6NVY1 386 aaPredicted RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 GSDMAQ96QA5 445 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 ZNHIT6Q9NWK9 470 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 ZNF213O14771 459 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 ATP6V1G2O95670 118 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 ITIH3Q06033 890 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 HAUS3Q68CZ6 603 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 IFT20Q8IY31 132 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 CACNA2D3Q8IZS8 1091 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 STAMBPL1Q96FJ0 436 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 SPAG5Q96R06 1193 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 NFU1Q9UMS0 254 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 SNUPNO95149 360 aaKnown RBP10.49□□□□□ -0.73
SYNPO2-204ENST00000448416 PPP1R7Q15435 360 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms