RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CTNNA3Q9UI47 895 aa29.55■■■□□ 2.32
UFD1-204ENST00000447868 NEDD4P46934 1319 aa29.54■■■□□ 2.32
UFD1-204ENST00000447868 IMMTQ16891 758 aaKnown RBP29.54■■■□□ 2.32
UFD1-204ENST00000447868 PPP4R3BQ5MIZ7 849 aa29.54■■■□□ 2.32
UFD1-204ENST00000447868 CHMP4CQ96CF2 233 aa29.54■■■□□ 2.32
UFD1-204ENST00000447868 GJD2Q9UKL4 321 aa29.54■■■□□ 2.32
UFD1-204ENST00000447868 SYNPO2Q9UMS6 1093 aa29.54■■■□□ 2.32
UFD1-204ENST00000447868 A0A0G2JMZ2 1700 aa29.54■■■□□ 2.32
UFD1-204ENST00000447868 PCP11498 1178 aaKnown RBP29.53■■■□□ 2.32
UFD1-204ENST00000447868 ELNP15502 786 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 PLS1Q14651 629 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 SLFN13Q68D06 897 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 GPR142Q7Z601 462 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 PLEKHH3Q7Z736 793 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 MB21D1Q8N884 522 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 SLAIN1Q8ND83 568 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 GMCL1P1Q8NEA9 526 aa29.53■■■□□ 2.32
UFD1-204ENST00000447868 PLXNB2O15031 1838 aa29.52■■■□□ 2.32
UFD1-204ENST00000447868 SGSM2O43147 1006 aa29.52■■■□□ 2.32
UFD1-204ENST00000447868 IRF5Q13568 498 aa29.52■■■□□ 2.32
UFD1-204ENST00000447868 NKX2-3Q8TAU0 364 aa29.52■■■□□ 2.32
UFD1-204ENST00000447868 PPP1R9AQ9ULJ8 1098 aa29.52■■■□□ 2.32
UFD1-204ENST00000447868 ISY1Q9ULR0 285 aaKnown RBP29.52■■■□□ 2.32
UFD1-204ENST00000447868 PTH1RQ03431 593 aa29.51■■■□□ 2.31
UFD1-204ENST00000447868 NUDT12Q9BQG2 462 aa29.51■■■□□ 2.31
UFD1-204ENST00000447868 SLF1Q9BQI6 1058 aa29.51■■■□□ 2.31
UFD1-204ENST00000447868 SPATC1LQ9H0A9 340 aa29.51■■■□□ 2.31
UFD1-204ENST00000447868 COL11A1P12107 1806 aaPredicted RBP29.5■■■□□ 2.31
UFD1-204ENST00000447868 BMP2KLQ5H9B9 411 aa29.5■■■□□ 2.31
UFD1-204ENST00000447868 TMEM106CQ9BVX2 250 aa29.5■■■□□ 2.31
UFD1-204ENST00000447868 MOV10L1Q9BXT6 1211 aaKnown RBP29.5■■■□□ 2.31
UFD1-204ENST00000447868 MTMR7Q9Y216 660 aa29.5■■■□□ 2.31
UFD1-204ENST00000447868 CYP2B6P20813 491 aa29.49■■■□□ 2.31
UFD1-204ENST00000447868 PXYLP1Q8TE99 480 aa29.49■■■□□ 2.31
UFD1-204ENST00000447868 SOCS4Q8WXH5 440 aa29.49■■■□□ 2.31
UFD1-204ENST00000447868 ESR2Q92731 530 aa29.49■■■□□ 2.31
UFD1-204ENST00000447868 TCP11L1Q9NUJ3 509 aa29.49■■■□□ 2.31
UFD1-204ENST00000447868 ADAMTS5Q9UNA0 930 aa29.49■■■□□ 2.31
UFD1-204ENST00000447868 POTEFA5A3E0 1075 aa29.48■■■□□ 2.31
UFD1-204ENST00000447868 VWA5AO00534 786 aa29.48■■■□□ 2.31
UFD1-204ENST00000447868 BMP3P12645 472 aa29.48■■■□□ 2.31
UFD1-204ENST00000447868 MCCP23508 829 aa29.48■■■□□ 2.31
UFD1-204ENST00000447868 TMEM132BQ14DG7 1078 aa29.48■■■□□ 2.31
UFD1-204ENST00000447868 MTFR1Q15390 333 aa29.48■■■□□ 2.31
UFD1-204ENST00000447868 B4E1Z4 1266 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 NOVP48745 357 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 RGS19P49795 217 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 UBXN2AP68543 259 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 MORN1Q5T089 497 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 ZKSCAN3Q9BRR0 538 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 FEM1BQ9UK73 627 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 IVNS1ABPQ9Y6Y0 642 aa29.47■■■□□ 2.31
UFD1-204ENST00000447868 KDM4AO75164 1064 aa29.46■■■□□ 2.31
UFD1-204ENST00000447868 INHAP05111 366 aa29.46■■■□□ 2.31
UFD1-204ENST00000447868 ERCC3P19447 782 aa29.46■■■□□ 2.31
UFD1-204ENST00000447868 SLC1A4P43007 532 aa29.46■■■□□ 2.31
UFD1-204ENST00000447868 NCAPG2Q86XI2 1143 aa29.46■■■□□ 2.31
UFD1-204ENST00000447868 KIFC2Q96AC6 838 aa29.46■■■□□ 2.31
UFD1-204ENST00000447868 U3KPZ7 1027 aaPredicted RBP29.46■■■□□ 2.31
UFD1-204ENST00000447868 TOP1P11387 765 aaKnown RBP29.45■■■□□ 2.31
UFD1-204ENST00000447868 PTPREP23469 700 aa29.45■■■□□ 2.31
UFD1-204ENST00000447868 RASGRP2Q7LDG7 609 aa29.45■■■□□ 2.31
UFD1-204ENST00000447868 PRPF38AQ8NAV1 312 aaKnown RBP29.45■■■□□ 2.31
UFD1-204ENST00000447868 GMCL1Q96IK5 515 aa29.45■■■□□ 2.31
UFD1-204ENST00000447868 TMEM47Q9BQJ4 181 aa29.45■■■□□ 2.31
UFD1-204ENST00000447868 TMEM232C9JQI7 657 aa29.44■■■□□ 2.3
UFD1-204ENST00000447868 RGS2P41220 211 aa29.44■■■□□ 2.3
UFD1-204ENST00000447868 IKQ13123 557 aaPredicted RBP29.44■■■□□ 2.3
UFD1-204ENST00000447868 SHCBP1Q8NEM2 672 aa29.44■■■□□ 2.3
UFD1-204ENST00000447868 USP6NLQ92738 828 aa29.44■■■□□ 2.3
UFD1-204ENST00000447868 ESYT1Q9BSJ8 1104 aa29.44■■■□□ 2.3
UFD1-204ENST00000447868 RBBP6Q7Z6E9 1792 aaKnown RBP29.44■■■□□ 2.3
UFD1-204ENST00000447868 SLC15A5A6NIM6 579 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 CCL5P13501 91 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 MAP2K5Q13163 448 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 KIAA1211Q6ZU35 1233 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 KCTD1Q719H9 257 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 REPS2Q8NFH8 660 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 KRT23Q9C075 422 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 CNNM2Q9H8M5 875 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 PPP4R2Q9NY27 417 aa29.43■■■□□ 2.3
UFD1-204ENST00000447868 CTDP1Q9Y5B0 961 aaPredicted RBP29.43■■■□□ 2.3
UFD1-204ENST00000447868 KIAA0100Q14667 2235 aaKnown RBP29.43■■■□□ 2.3
UFD1-204ENST00000447868 STAT3P40763 770 aa29.42■■■□□ 2.3
UFD1-204ENST00000447868 RCSD1Q6JBY9 416 aa29.42■■■□□ 2.3
UFD1-204ENST00000447868 TRIB2Q92519 343 aa29.42■■■□□ 2.3
UFD1-204ENST00000447868 UNC93B1Q9H1C4 597 aa29.42■■■□□ 2.3
UFD1-204ENST00000447868 MROH8Q9H579 483 aa29.42■■■□□ 2.3
UFD1-204ENST00000447868 ZSWIM5Q9P217 1185 aa29.42■■■□□ 2.3
UFD1-204ENST00000447868 ZBED4O75132 1171 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 HMGCRP04035 888 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 CYP21A2P08686 494 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 XRCC5P13010 732 aaKnown RBP29.41■■■□□ 2.3
UFD1-204ENST00000447868 EN2P19622 333 aaPredicted RBP29.41■■■□□ 2.3
UFD1-204ENST00000447868 STAT2P52630 851 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 MLLT1Q03111 559 aaPredicted RBP29.41■■■□□ 2.3
UFD1-204ENST00000447868 GRB14Q14449 540 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 CCDC96Q2M329 555 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 IQCA1Q86XH1 822 aa29.41■■■□□ 2.3
UFD1-204ENST00000447868 RIOX2Q8IUF8 465 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms