RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 JPH3Q8WXH2 748 aaPredicted RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 ZNF512BQ96KM6 892 aaPredicted RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 TRIM8Q9BZR9 551 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 ZC3H12CQ9C0D7 883 aaKnown RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 FBRSQ9HAH7 460 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 LUC7LQ9NQ29 371 aaKnown RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 FAM86C1Q9NVL1 165 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 KLF15Q9UIH9 416 aa4.89□□□□□ -1.63
PMS1-216ENST00000447734 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
PMS1-216ENST00000447734 VSTM5A8MXK1 200 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 ZBTB42B2RXF5 422 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 GABRDO14764 452 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 NPHP1O15259 732 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 PRODHO43272 600 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 DNAJA2O60884 412 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 EFCAB14O75071 495 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 ABLIM3O94929 683 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 F2P00734 622 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 ASLP04424 464 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 NBPF7P0C2Y1 421 aaPredicted RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 U2AF1L5P0DN76 240 aaPredicted RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 FGFR1P11362 822 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 PABPC1P11940 636 aaKnown RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 BMP4P12644 408 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 U2AF1Q01081 240 aaKnown RBP eCLIP4.88□□□□□ -1.63
PMS1-216ENST00000447734 POU5F1BQ06416 359 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 TCIRG1Q13488 830 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 IKBKEQ14164 716 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 INPP5AQ14642 412 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 SEPT7Q16181 437 aaKnown RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 PCSK7Q16549 785 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 RSPO4Q2I0M5 234 aaPredicted RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 GRAMD1BQ3KR37 738 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 CXorf57Q6NSI4 855 aaKnown RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 LRFN4Q6PJG9 635 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 CLEC4GQ6UXB4 293 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 NSMFQ6X4W1 530 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 NME8Q8N427 588 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 LRRN4CLQ8ND94 238 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 SLC7A14Q8TBB6 771 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 PI4K2BQ8TCG2 481 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 COG1Q8WTW3 980 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 E2F7Q96AV8 911 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 ELMO3Q96BJ8 720 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 TRIM11Q96F44 468 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 DHRS1Q96LJ7 313 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 RHOBTB2Q9BYZ6 727 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 IGFLR1Q9H665 355 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 IFT22Q9H7X7 185 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 TRIM39Q9HCM9 518 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 PRDM11Q9NQV5 511 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 CACNA2D2Q9NY47 1150 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 OBP2AQ9NY56 170 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 IP6K2Q9UHH9 426 aa4.88□□□□□ -1.63
PMS1-216ENST00000447734 ATXN7L1Q9ULK2 861 aaPredicted RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 APOBEC2Q9Y235 224 aaKnown RBP4.88□□□□□ -1.63
PMS1-216ENST00000447734 NEURL1BA8MQ27 555 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 FBXO21O94952 628 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 FGAP02671 866 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 TP53P04637 393 aaPredicted RBP4.87□□□□□ -1.63
PMS1-216ENST00000447734 ITGAVP06756 1048 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 JMJD7P0C870 316 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PYGMP11217 842 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 FGFR3P22607 806 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 POLR2BP30876 1174 aaKnown RBP4.87□□□□□ -1.63
PMS1-216ENST00000447734 PMS1P54277 932 aaKnown RBP4.87□□□□□ -1.63
PMS1-216ENST00000447734 CABP4P57796 275 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 HNRNPUQ00839 825 aaKnown RBP eCLIP4.87□□□□□ -1.63
PMS1-216ENST00000447734 TBC1D8BQ0IIM8 1120 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PICALMQ13492 652 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 RAPGEF1Q13905 1077 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 MORC3Q14149 939 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 ZNF460Q14592 562 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PTPN21Q16825 1174 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 NKAPLQ5M9Q1 402 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 TMEM201Q5SNT2 666 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 HEATR6Q6AI08 1181 aaKnown RBP4.87□□□□□ -1.63
PMS1-216ENST00000447734 ZNF227Q86WZ6 799 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 IFNL3Q8IZI9 196 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PAF1Q8N7H5 531 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 OR2W6PQ8NHA6 318 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 LACRTQ9GZZ8 138 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 SLC52A2Q9HAB3 445 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PPCSQ9HAB8 311 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 OSGEPQ9NPF4 335 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 USP25Q9UHP3 1055 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 TAGLN3Q9UI15 199 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PHF24Q9UPV7 400 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 LAS1LQ9Y4W2 734 aaKnown RBP4.87□□□□□ -1.63
PMS1-216ENST00000447734 TACC3Q9Y6A5 838 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 TNKSO95271 1327 aa4.87□□□□□ -1.63
PMS1-216ENST00000447734 PRAMEF27A3QJZ7 478 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 CHURC1-FNTBB4DL54 471 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 NEMP1O14524 444 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 ZEB2O60315 1214 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 PGRP06401 933 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 EPHX1P07099 455 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 TRIM27P14373 513 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 CD53P19397 219 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 CD33P20138 364 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms