RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 HEATR3Q7Z4Q2 680 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 MTMR4Q9NYA4 1195 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 CLIP2Q9UDT6 1046 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 FOCADQ5VW36 1801 aa22.29■■□□□ 1.16
FAM3A-215ENST00000447601 GOLGA8HP0CJ92 632 aa22.28■■□□□ 1.16
FAM3A-215ENST00000447601 POSTNQ15063 836 aa22.28■■□□□ 1.16
FAM3A-215ENST00000447601 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.28■■□□□ 1.16
FAM3A-215ENST00000447601 CCDC12Q8WUD4 166 aaPredicted RBP22.28■■□□□ 1.16
FAM3A-215ENST00000447601 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
FAM3A-215ENST00000447601 STXBP3O00186 592 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 WNT7AO00755 349 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 IKBKBO14920 756 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 OFD1O75665 1012 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 PTGDRQ13258 359 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 DACT2Q5SW24 774 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 RRP36Q96EU6 259 aaKnown RBP22.27■■□□□ 1.16
FAM3A-215ENST00000447601 SERTAD1Q9UHV2 236 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 PCDHA5Q9Y5H7 936 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 MYH1P12882 1939 aa22.27■■□□□ 1.16
FAM3A-215ENST00000447601 C10orf71Q711Q0 1435 aa22.27■■□□□ 1.15
FAM3A-215ENST00000447601 IGKV6D-41A0A0C4DH26 115 aa22.27■■□□□ 1.15
FAM3A-215ENST00000447601 POTEAQ6S8J7 498 aa22.27■■□□□ 1.15
FAM3A-215ENST00000447601 SUPT20HQ8NEM7 779 aa22.27■■□□□ 1.15
FAM3A-215ENST00000447601 C7orf43Q8WVR3 580 aa22.27■■□□□ 1.15
FAM3A-215ENST00000447601 EHD4Q9H223 541 aa22.27■■□□□ 1.15
FAM3A-215ENST00000447601 CCDC194A0A1B0GVG4 234 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 M0R2N6 131 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 ACTN4O43707 911 aaKnown RBP22.26■■□□□ 1.15
FAM3A-215ENST00000447601 AKR1B1P15121 316 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 TYW1BQ6NUM6 668 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 USP17L2Q6R6M4 530 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 KIAA0825Q8IV33 1275 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 KCNQ5Q9NR82 932 aa22.26■■□□□ 1.15
FAM3A-215ENST00000447601 ZNF219Q9P2Y4 722 aaPredicted RBP22.26■■□□□ 1.15
FAM3A-215ENST00000447601 SEC63Q9UGP8 760 aaKnown RBP22.26■■□□□ 1.15
FAM3A-215ENST00000447601 ASPRV1Q53RT3 343 aa22.25■■□□□ 1.15
FAM3A-215ENST00000447601 PPP4R3BQ5MIZ7 849 aa22.25■■□□□ 1.15
FAM3A-215ENST00000447601 NT5DC1Q5TFE4 455 aa22.25■■□□□ 1.15
FAM3A-215ENST00000447601 USP49Q70CQ1 688 aa22.25■■□□□ 1.15
FAM3A-215ENST00000447601 FOXP4Q8IVH2 680 aaPredicted RBP22.25■■□□□ 1.15
FAM3A-215ENST00000447601 SYMPKQ92797 1274 aaKnown RBP22.25■■□□□ 1.15
FAM3A-215ENST00000447601 TTLL1O95922 423 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 MCM7P33993 719 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 ARL6IP4Q66PJ3 421 aaKnown RBP22.24■■□□□ 1.15
FAM3A-215ENST00000447601 ISM2Q6H9L7 571 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 PDILTQ8N807 584 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 KCNF1Q9H3M0 494 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 PCDHA6Q9UN73 950 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 PCDHA8Q9Y5H6 950 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 VWA3AA6NCI4 1184 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 ADAMTS3O15072 1205 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 PDHBP11177 359 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 PTGS1P23219 599 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 SHMT1P34896 483 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 CCDC186Q7Z3E2 898 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 TRIML1Q8N9V2 468 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 SMARCE1Q969G3 411 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 EPSTI1Q96J88 318 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 PYM1Q9BRP8 204 aaKnown RBP22.24■■□□□ 1.15
FAM3A-215ENST00000447601 ZMYND12Q9H0C1 365 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 DHX36Q9H2U1 1008 aaKnown RBP22.24■■□□□ 1.15
FAM3A-215ENST00000447601 SERPINA10Q9UK55 444 aa22.24■■□□□ 1.15
FAM3A-215ENST00000447601 USP17L5A8MUK1 530 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 hCG_1984214I3L0E3 225 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 FOXN1O15353 648 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 SLFN14P0C7P3 912 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 NAPAP54920 295 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 NFIAQ12857 509 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 NCAPHQ15003 741 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 AOC3Q16853 763 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 RASGRP2Q7LDG7 609 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 ZNF713Q8N859 430 aaPredicted RBP22.23■■□□□ 1.15
FAM3A-215ENST00000447601 CCDC17Q96LX7 622 aa22.23■■□□□ 1.15
FAM3A-215ENST00000447601 SNHG28P0DPA3 235 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 GNA11P29992 359 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 SARSP49591 514 aaKnown RBP22.22■■□□□ 1.15
FAM3A-215ENST00000447601 MYL5Q02045 173 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 DHX58Q96C10 678 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 IDI2Q9BXS1 227 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 C6orf50Q9HD87 102 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 DACH1Q9UI36 760 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 NPM3O75607 178 aaKnown RBP22.22■■□□□ 1.15
FAM3A-215ENST00000447601 SMC2O95347 1197 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 RBM5P52756 815 aaKnown RBP eCLIP22.22■■□□□ 1.15
FAM3A-215ENST00000447601 SOGA3Q5TF21 947 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 HOMER1Q86YM7 354 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 RASGRP4Q8TDF6 673 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 RIOX1Q9H6W3 641 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 MAN1B1Q9UKM7 699 aa22.22■■□□□ 1.15
FAM3A-215ENST00000447601 SLX4Q8IY92 1834 aa22.21■■□□□ 1.15
FAM3A-215ENST00000447601 MYO1BO43795 1136 aa22.21■■□□□ 1.15
FAM3A-215ENST00000447601 LONP1P36776 959 aaKnown RBP22.21■■□□□ 1.15
FAM3A-215ENST00000447601 LRRC47Q8N1G4 583 aaKnown RBP22.21■■□□□ 1.15
FAM3A-215ENST00000447601 SPATA20Q8TB22 786 aa22.21■■□□□ 1.15
FAM3A-215ENST00000447601 CPVLQ9H3G5 476 aa22.21■■□□□ 1.15
FAM3A-215ENST00000447601 PRR29P0C7W0 189 aa22.2■■□□□ 1.14
FAM3A-215ENST00000447601 KRT25Q7Z3Z0 450 aa22.2■■□□□ 1.14
FAM3A-215ENST00000447601 MLKLQ8NB16 471 aa22.2■■□□□ 1.14
FAM3A-215ENST00000447601 NRBP1Q9UHY1 535 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms