RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF428Q96B54 188 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 CD320Q9NPF0 282 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 ZNF70Q9UC06 446 aaPredicted RBP4.3□□□□□ -1.72
PMS1-215ENST00000447232 NDUFB9Q9Y6M9 179 aa4.3□□□□□ -1.72
PMS1-215ENST00000447232 TRAK2O60296 914 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 ANXA1P04083 346 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 ITGB8P26012 769 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 CCT4P50991 539 aaKnown RBP4.29□□□□□ -1.72
PMS1-215ENST00000447232 RTP1P59025 263 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 FKBP1AP62942 108 aaKnown RBP4.29□□□□□ -1.72
PMS1-215ENST00000447232 PLXNA1Q9UIW2 1896 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 SLC45A1Q9Y2W3 748 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 TRANK1O15050 2925 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 RPAP1Q9BWH6 1393 aaPredicted RBP4.29□□□□□ -1.72
PMS1-215ENST00000447232 KLRK1P26718 216 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 PRKAR2BP31323 418 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 CLN3Q13286 438 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 GAS6Q14393 721 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 PNISRQ8TF01 805 aaKnown RBP4.29□□□□□ -1.72
PMS1-215ENST00000447232 XAGE3Q8WTP9 111 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 SENP6Q9GZR1 1112 aaPredicted RBP4.29□□□□□ -1.72
PMS1-215ENST00000447232 OSBPL3Q9H4L5 887 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 PDLIM7Q9NR12 457 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 MINPP1Q9UNW1 487 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 PCDHB11Q9Y5F2 797 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 PTPRFP10586 1907 aa4.29□□□□□ -1.72
PMS1-215ENST00000447232 TRIM43BA6NCK2 446 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 TRIM28Q13263 835 aaKnown RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 SUZ12Q15022 739 aaKnown RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 SNX17Q15036 470 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 DBN1Q16643 649 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 FAM110CQ1W6H9 321 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 ANKRD18AQ8IVF6 992 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 ZNF592Q92610 1267 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 PBX4Q9BYU1 374 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 GRIP2Q9C0E4 1043 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 TDRD3Q9H7E2 651 aaKnown RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 CEP126Q9P2H0 1117 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 SPEF2Q9C093 1822 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 TCP10L2B9ZVM9 353 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 F8W031 263 aaPredicted RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 CXCL11O14625 94 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 ARHGEF15O94989 841 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 IGFBP4P22692 258 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 INPP5BP32019 993 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 POU4F2Q12837 409 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 CCDC152Q4G0S7 254 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 TPRNQ4KMQ1 711 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 CYP2U1Q7Z449 544 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 SVOPQ8N4V2 548 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 HERVK_113Q902F9 699 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 CD209Q9NNX6 404 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 BSDC1Q9NW68 430 aaPredicted RBP4.28□□□□□ -1.72
PMS1-215ENST00000447232 ZNF112Q9UJU3 913 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 LEMD3Q9Y2U8 911 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 DAGLAQ9Y4D2 1042 aa4.28□□□□□ -1.72
PMS1-215ENST00000447232 ZFHX2Q9C0A1 2572 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 A0A0G2JLL6 359 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 XRCC5P13010 732 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 CCND3P30281 292 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 TNNI2P48788 182 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 SRSF11Q05519 484 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 CACNB2Q08289 660 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 AIMP1Q12904 312 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 NOL9Q5SY16 702 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 PRRT2Q7Z6L0 340 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 TRIM22Q8IYM9 498 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 ANKRD13CQ8N6S4 541 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 ZNF837Q96EG3 531 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 UIMC1Q96RL1 719 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 SERPINA10Q9UK55 444 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 DYRK1BQ9Y463 629 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 APBB1O00213 710 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 DNM1LO00429 736 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 RBM5P52756 815 aaKnown RBP eCLIP4.27□□□□□ -1.73
PMS1-215ENST00000447232 RASIP1Q5U651 963 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 C1orf53Q5VUE5 145 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 FASTKD5Q7L8L6 764 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 DZIP1LQ8IYY4 767 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 PLBD2Q8NHP8 589 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 ANKS1AQ92625 1134 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 GMCL1Q96IK5 515 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 CCDC85AQ96PX6 553 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 ARHGEF10LQ9HCE6 1279 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 PRDM5Q9NQX1 630 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 COG5Q9UP83 839 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 ATRXP46100 2492 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 PRRC2BQ5JSZ5 2229 aaKnown RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 PTPRZ1P23471 2315 aaPredicted RBP4.27□□□□□ -1.73
PMS1-215ENST00000447232 CHD6Q8TD26 2715 aa4.27□□□□□ -1.73
PMS1-215ENST00000447232 A0A0G2JMZ2 1700 aa4.26□□□□□ -1.73
PMS1-215ENST00000447232 IL1R1P14778 569 aa4.26□□□□□ -1.73
PMS1-215ENST00000447232 POU3F3P20264 500 aaPredicted RBP4.26□□□□□ -1.73
PMS1-215ENST00000447232 WDR44Q5JSH3 913 aa4.26□□□□□ -1.73
PMS1-215ENST00000447232 LYPD4Q6UWN0 246 aa4.26□□□□□ -1.73
PMS1-215ENST00000447232 SLC39A5Q6ZMH5 540 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms