RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KAT6BQ8WYB5 2073 aa21.55■■□□□ 1.04
SDCBP-204ENST00000447182 CDC5LQ99459 802 aaKnown RBP21.55■■□□□ 1.04
SDCBP-204ENST00000447182 BLZF1Q9H2G9 400 aa21.55■■□□□ 1.04
SDCBP-204ENST00000447182 GNL3LQ9NVN8 582 aaKnown RBP21.55■■□□□ 1.04
SDCBP-204ENST00000447182 ADAM21Q9UKJ8 722 aa21.55■■□□□ 1.04
SDCBP-204ENST00000447182 IQSEC3Q9UPP2 1182 aaPredicted RBP21.55■■□□□ 1.04
SDCBP-204ENST00000447182 ARL6IP4Q66PJ3 421 aaKnown RBP21.55■■□□□ 1.04
SDCBP-204ENST00000447182 STAMQ92783 540 aa21.55■■□□□ 1.04
SDCBP-204ENST00000447182 CTAGE15A4D2H0 777 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 KCNJ18B7U540 433 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 RNF225M0QZC1 329 aaPredicted RBP21.54■■□□□ 1.04
SDCBP-204ENST00000447182 CTAGE8P0CG41 777 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 KCNJ12Q14500 433 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 CTAGE6Q86UF2 777 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 CTAGE4Q8IX94 777 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 NUP88Q99567 741 aaPredicted RBP21.54■■□□□ 1.04
SDCBP-204ENST00000447182 VPS16Q9H269 839 aa21.54■■□□□ 1.04
SDCBP-204ENST00000447182 COL1A1P02452 1464 aaPredicted RBP21.53■■□□□ 1.04
SDCBP-204ENST00000447182 NTSR2O95665 410 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 AMPD2Q01433 879 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 IL17AQ16552 155 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
SDCBP-204ENST00000447182 SRBD1Q8N5C6 995 aaKnown RBP21.53■■□□□ 1.04
SDCBP-204ENST00000447182 NELFBQ8WX92 580 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 GBP3Q9H0R5 595 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.53■■□□□ 1.04
SDCBP-204ENST00000447182 RREB1Q92766 1687 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 ORC4O43929 436 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 ABL1P00519 1130 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 SCG2P13521 617 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 IRX5P78411 483 aaPredicted RBP21.53■■□□□ 1.04
SDCBP-204ENST00000447182 CTCFLQ8NI51 663 aaPredicted RBP21.53■■□□□ 1.04
SDCBP-204ENST00000447182 BTG4Q9NY30 223 aa21.53■■□□□ 1.04
SDCBP-204ENST00000447182 CYP2D7A0A087X1C5 515 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 H7C1D1 291 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 EIF3JO75822 258 aaKnown RBP21.52■■□□□ 1.04
SDCBP-204ENST00000447182 CAMTA2O94983 1202 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 RPN1P04843 607 aaKnown RBP21.52■■□□□ 1.04
SDCBP-204ENST00000447182 KRT9P35527 623 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 LONP1P36776 959 aaKnown RBP21.52■■□□□ 1.04
SDCBP-204ENST00000447182 CTR9Q6PD62 1173 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 ABCB6Q9NP58 842 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 CCDC87Q9NVE4 849 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 TAB2Q9NYJ8 693 aa21.52■■□□□ 1.04
SDCBP-204ENST00000447182 CDC25AP30304 524 aa21.52■■□□□ 1.03
SDCBP-204ENST00000447182 DYNLL1P63167 89 aaKnown RBP21.52■■□□□ 1.03
SDCBP-204ENST00000447182 PFKFB3Q16875 520 aaPredicted RBP21.52■■□□□ 1.03
SDCBP-204ENST00000447182 PIK3AP1Q6ZUJ8 805 aa21.52■■□□□ 1.03
SDCBP-204ENST00000447182 PDE11AQ9HCR9 933 aa21.52■■□□□ 1.03
SDCBP-204ENST00000447182 A0A1B0GUL6 1792 aa21.51■■□□□ 1.03
SDCBP-204ENST00000447182 NLRP5P59047 1200 aa21.51■■□□□ 1.03
SDCBP-204ENST00000447182 UBE4AQ14139 1066 aa21.51■■□□□ 1.03
SDCBP-204ENST00000447182 MYO6Q9UM54 1294 aa21.51■■□□□ 1.03
SDCBP-204ENST00000447182 COBLO75128 1261 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 MCM7P33993 719 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 EPN1Q9Y6I3 576 aaPredicted RBP21.5■■□□□ 1.03
SDCBP-204ENST00000447182 A0A1W2PQC6 194 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 NDUFA10O95299 355 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 PRCPP42785 496 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 GYG1P46976 350 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 SEMA3FQ13275 785 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 MCM6Q14566 821 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 ZSCAN26Q16670 478 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 WDR93Q6P2C0 686 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 C4orf32Q8N8J7 132 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 SLF1Q9BQI6 1058 aa21.5■■□□□ 1.03
SDCBP-204ENST00000447182 COL4A1P02462 1669 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 EXOC5O00471 708 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 VSNL1P62760 191 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 UBXN1Q04323 297 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 TMED8Q6PL24 325 aaPredicted RBP21.49■■□□□ 1.03
SDCBP-204ENST00000447182 IRF2BP1Q8IU81 584 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 GOLGA5Q8TBA6 731 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 ZNF384Q8TF68 577 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 DNAJC7Q99615 494 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 SCN7AQ01118 1682 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 USP17L12C9JPN9 530 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 USP17L21D6R901 530 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 PSMD14O00487 310 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 RHOXF2BP0C7M4 288 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 CALML3P27482 149 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 GYS2P54840 703 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 ADSSL1Q8N142 457 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 OR8K1Q8NGG5 319 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 RHOXF2Q9BQY4 288 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 TSPYL1Q9H0U9 437 aa21.49■■□□□ 1.03
SDCBP-204ENST00000447182 NIP7Q9Y221 180 aaKnown RBP eCLIP21.49■■□□□ 1.03
SDCBP-204ENST00000447182 REXO2Q9Y3B8 237 aaKnown RBP21.49■■□□□ 1.03
SDCBP-204ENST00000447182 TFRCP02786 760 aaKnown RBP21.48■■□□□ 1.03
SDCBP-204ENST00000447182 PARP1P09874 1014 aaKnown RBP21.48■■□□□ 1.03
SDCBP-204ENST00000447182 CRKLP46109 303 aaKnown RBP21.48■■□□□ 1.03
SDCBP-204ENST00000447182 RAD51AP2Q09MP3 1159 aa21.48■■□□□ 1.03
SDCBP-204ENST00000447182 WWC2Q6AWC2 1192 aa21.48■■□□□ 1.03
SDCBP-204ENST00000447182 ZNF662Q6ZS27 426 aa21.48■■□□□ 1.03
SDCBP-204ENST00000447182 CHP1Q99653 195 aa21.48■■□□□ 1.03
SDCBP-204ENST00000447182 HAUS4Q9H6D7 363 aa21.48■■□□□ 1.03
SDCBP-204ENST00000447182 LAMB1P07942 1786 aa21.48■■□□□ 1.03
SDCBP-204ENST00000447182 LGALS16A8MUM7 142 aa21.47■■□□□ 1.03
SDCBP-204ENST00000447182 EEF1GP26641 437 aaKnown RBP21.47■■□□□ 1.03
SDCBP-204ENST00000447182 SLC20A2Q08357 652 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms