RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 KIAA0355O15063 1070 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 PQBP1O60828 265 aaKnown RBP8.83□□□□□ -1
HDAC9-216ENST00000446646 GPR37L1O60883 481 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 ENTPD3O75355 529 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 CYBAP13498 195 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 FGFR2P21802 821 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 MAPK4P31152 587 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 IRX3P78415 501 aaPredicted RBP8.83□□□□□ -1
HDAC9-216ENST00000446646 NHLH1Q02575 133 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 FPGSQ05932 587 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 FKBP5Q13451 457 aaPredicted RBP8.83□□□□□ -1
HDAC9-216ENST00000446646 CAVIN4Q5BKX8 364 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 METTL24Q5JXM2 366 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 PRAMEF19Q5SWL8 479 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
HDAC9-216ENST00000446646 EDC3Q96F86 508 aaKnown RBP8.83□□□□□ -1
HDAC9-216ENST00000446646 NKX2-4Q9H2Z4 354 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 PLXNA1Q9UIW2 1896 aa8.83□□□□□ -1
HDAC9-216ENST00000446646 SMIM22K7EJ46 135 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 RFXAPO00287 272 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 APAF1O14727 1248 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 TLL1O43897 1013 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 CLTBP09497 229 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 ACRP10323 421 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 MYOGP15173 224 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 HOXA7P31268 230 aaPredicted RBP8.82□□□□□ -1
HDAC9-216ENST00000446646 LRRC41Q15345 812 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 FAM47AQ5JRC9 791 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 TMEM240Q5SV17 173 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 RASIP1Q5U651 963 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 MFSD14CQ5VZR4 134 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 CCDC129Q6ZRS4 1044 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 STK31Q9BXU1 1019 aa8.82□□□□□ -1
HDAC9-216ENST00000446646 GAKO14976 1311 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 MROH5Q6ZUA9 1318 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 RIF1Q5UIP0 2472 aaKnown RBP8.81□□□□□ -1
HDAC9-216ENST00000446646 CACNA1BQ00975 2339 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 GRM8O00222 908 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 PDE8BO95263 885 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 RAG1P15918 1043 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 CAP2P40123 477 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 FAAP100Q0VG06 881 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 PABPC4Q13310 644 aaKnown RBP eCLIP8.81□□□□□ -1
HDAC9-216ENST00000446646 PPP1R18Q6NYC8 613 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 ANKRD44Q8N8A2 993 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 ZNF384Q8TF68 577 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 LENG1Q96BZ8 264 aaPredicted RBP8.81□□□□□ -1
HDAC9-216ENST00000446646 TACC3Q9Y6A5 838 aa8.81□□□□□ -1
HDAC9-216ENST00000446646 ZNF318Q5VUA4 2279 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 EPOPA6NHQ4 379 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 USP17L5A8MUK1 530 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 KBTBD13C9JR72 458 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
HDAC9-216ENST00000446646 NBPF7P0C2Y1 421 aaPredicted RBP8.8□□□□□ -1
HDAC9-216ENST00000446646 RABGGTBP53611 331 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 BACE1P56817 501 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 RHBDL3P58872 404 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 ATP2B2Q01814 1243 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 GRB14Q14449 540 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
HDAC9-216ENST00000446646 TWISTNBQ3B726 338 aaPredicted RBP8.8□□□□□ -1
HDAC9-216ENST00000446646 WDR78Q5VTH9 848 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 C1orf53Q5VUE5 145 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 RDH13Q8NBN7 331 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 ARRDC4Q8NCT1 418 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 WDR66Q8TBY9 1149 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 FBXL18Q96ME1 805 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 IRX2Q9BZI1 471 aaPredicted RBP8.8□□□□□ -1
HDAC9-216ENST00000446646 FAM117AQ9C073 453 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-216ENST00000446646 MRS2Q9HD23 443 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 TMEM39AQ9NV64 488 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 BTBD7Q9P203 1132 aa8.8□□□□□ -1
HDAC9-216ENST00000446646 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 PI4K2BG5E9Z4 385 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 RBAK-RBAKDNI3L0D1 243 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 ERC2O15083 957 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 MSCO60682 206 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 COBLO75128 1261 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 LDHBP07195 334 aaKnown RBP8.79□□□□□ -1
HDAC9-216ENST00000446646 HOXC6P09630 235 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 BTDP43251 543 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 CCAR1Q8IX12 1150 aaKnown RBP8.79□□□□□ -1
HDAC9-216ENST00000446646 BICC1Q9H694 974 aaKnown RBP8.79□□□□□ -1
HDAC9-216ENST00000446646 DNAJC18Q9H819 358 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 PHF24Q9UPV7 400 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 NCOR2Q9Y618 2525 aa8.79□□□□□ -1
HDAC9-216ENST00000446646 CFAP47Q6ZTR5 3102 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 A0A1W2PQ45 241 aaPredicted RBP8.78□□□□□ -1
HDAC9-216ENST00000446646 A0A1W2PQY0 241 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 SLC15A5A6NIM6 579 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 ARHGEF15O94989 841 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 PGK1P00558 417 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 CSF2RAP15509 400 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 PHKA1P46020 1223 aa8.78□□□□□ -1
HDAC9-216ENST00000446646 PUM3Q15397 648 aaKnown RBP8.78□□□□□ -1
HDAC9-216ENST00000446646 ZNF365Q70YC5 407 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms