RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 PUM3Q15397 648 aaKnown RBP7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 CDC42EP5Q6NZY7 148 aa7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 WDR66Q8TBY9 1149 aa7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 DEFB118Q96PH6 123 aa7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 STAP2Q9UGK3 403 aa7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 ATRNL1Q5VV63 1379 aa7.27□□□□□ -1.25
HMGN1P36-201ENST00000446623 UNC80Q8N2C7 3258 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 A0A0G2JLL6 359 aaPredicted RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 PHF20L1A8MW92 1017 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 ESPNB1AK53 854 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 TERTO14746 1132 aaKnown RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 TNPO2O14787 897 aaKnown RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 MAN1A2O60476 641 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 WFS1O76024 890 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 NFX1Q12986 1120 aaKnown RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 IRF5Q13568 498 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 Q6ZVU0 165 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 FASTKD5Q7L8L6 764 aaKnown RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 PRRT2Q7Z6L0 340 aaPredicted RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 PAK6Q9NQU5 681 aaPredicted RBP7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 PICK1Q9NRD5 415 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 USP40Q9NVE5 1235 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 AFG3L2Q9Y4W6 797 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 ZHX2Q9Y6X8 837 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 DOCK3Q8IZD9 2030 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 PHIPQ8WWQ0 1821 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 DOCK1Q14185 1865 aa7.26□□□□□ -1.25
HMGN1P36-201ENST00000446623 RFX7Q2KHR2 1363 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 EYA2O00167 538 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 LDHBP07195 334 aaKnown RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 SLC5A1P13866 664 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 CAPN2P17655 700 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 PTPRAP18433 802 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 PRDX5P30044 214 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 ADD1P35611 737 aaKnown RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 ZEB1P37275 1124 aaPredicted RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 ABL2P42684 1182 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 GADL1Q6ZQY3 521 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 SCYL3Q8IZE3 742 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 SMCR8Q8TEV9 937 aaPredicted RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 DIS3LQ8TF46 1054 aaKnown RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 LPIN2Q92539 896 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 PAWRQ96IZ0 340 aaKnown RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 SLC45A1Q9Y2W3 748 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 BDP1A6H8Y1 2624 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 MYH2Q9UKX2 1941 aa7.25□□□□□ -1.25
HMGN1P36-201ENST00000446623 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 FIGNL2A6NMB9 653 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 LILRA1O75019 489 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 RFX5P48382 616 aaPredicted RBP7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 RGS3P49796 1198 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 MCM6Q14566 821 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 ATG9AQ7Z3C6 839 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 NECAB2Q7Z6G3 386 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 C7orf61Q8IZ16 206 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 ANKRD13CQ8N6S4 541 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 DNMT3LQ9UJW3 386 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 LRRFIP2Q9Y608 721 aaKnown RBP7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 VCANP13611 3396 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 SALL1Q9NSC2 1324 aa7.24□□□□□ -1.25
HMGN1P36-201ENST00000446623 LOC285556D6RIA3 1793 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 CTNND1O60716 968 aaKnown RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 ENTPD3O75355 529 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 SLURP2P0DP57 97 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 BMP8BP34820 402 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 MAP3K10Q02779 954 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 VAC14Q08AM6 782 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 TREML2Q5T2D2 321 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 Q7L0L9 218 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 CCDC84Q86UT8 332 aaPredicted RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 DEFB123Q8N688 67 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 COA7Q96BR5 231 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 INSM2Q96T92 566 aaPredicted RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 GDF15Q99988 308 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 IDI2Q9BXS1 227 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 USP44Q9H0E7 712 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 MRS2Q9HD23 443 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 GNL3LQ9NVN8 582 aaKnown RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 AGTPBP1Q9UPW5 1226 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 DDX60LQ5H9U9 1706 aaKnown RBP7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 GAKO14976 1311 aa7.23□□□□□ -1.25
HMGN1P36-201ENST00000446623 DDTLA6NHG4 134 aaPredicted RBP7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 TTLL8A6PVC2 850 aa7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 HMGCRP04035 888 aa7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 PICALMQ13492 652 aa7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 ATP2B3Q16720 1220 aa7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 FAM110CQ1W6H9 321 aa7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 ZSCAN29Q8IWY8 852 aaPredicted RBP7.22□□□□□ -1.25
HMGN1P36-201ENST00000446623 ZMYND8Q9ULU4 1186 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms