RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PRRT2Q7Z6L0 340 aaPredicted RBP20.29■□□□□ 0.84
SGCE-206ENST00000445866 NCOA5Q9HCD5 579 aaKnown RBP20.29■□□□□ 0.84
SGCE-206ENST00000445866 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
SGCE-206ENST00000445866 CCDC196A0A1B0GTZ2 297 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 SNHG28P0DPA3 235 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 GRM4Q14833 912 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 PPP2R5BQ15173 497 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 FAM83BQ5T0W9 1011 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 FASTKD5Q7L8L6 764 aaKnown RBP20.29■□□□□ 0.84
SGCE-206ENST00000445866 STAG2Q8N3U4 1231 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 MAD2L2Q9UI95 211 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 PALM3A6NDB9 673 aaPredicted RBP20.28■□□□□ 0.84
SGCE-206ENST00000445866 CETPP11597 493 aa20.28■□□□□ 0.84
SGCE-206ENST00000445866 ZNF543Q08ER8 600 aa20.28■□□□□ 0.84
SGCE-206ENST00000445866 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
SGCE-206ENST00000445866 MS4A4AQ96JQ5 239 aa20.28■□□□□ 0.84
SGCE-206ENST00000445866 C12orf42Q96LP6 360 aa20.28■□□□□ 0.84
SGCE-206ENST00000445866 FAM217BQ9NTX9 383 aaPredicted RBP20.28■□□□□ 0.84
SGCE-206ENST00000445866 LAMB1P07942 1786 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 TMEM232C9JQI7 657 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 KLRF2D3W0D1 207 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
SGCE-206ENST00000445866 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
SGCE-206ENST00000445866 DHX16O60231 1041 aaKnown RBP20.27■□□□□ 0.84
SGCE-206ENST00000445866 SLC10A3P09131 477 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 VCAM1P19320 739 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 CDC27P30260 824 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 GNAQP50148 359 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 SCRN1Q12765 414 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 IKQ13123 557 aaPredicted RBP20.27■□□□□ 0.84
SGCE-206ENST00000445866 BECN1Q14457 450 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 ASPRV1Q53RT3 343 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 TTBK2Q6IQ55 1244 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 CYP4F22Q6NT55 531 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 CCDC82Q8N4S0 544 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 RPAP3Q9H6T3 665 aaPredicted RBP20.27■□□□□ 0.84
SGCE-206ENST00000445866 RBM28Q9NW13 759 aaKnown RBP20.27■□□□□ 0.84
SGCE-206ENST00000445866 PAPPA2Q9BXP8 1791 aa20.27■□□□□ 0.84
SGCE-206ENST00000445866 CCL15-CCL14A0A0B4J2E2 113 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 CPLX1O14810 134 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 CCL15Q16663 113 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 SAMD1Q6SPF0 538 aaPredicted RBP20.26■□□□□ 0.83
SGCE-206ENST00000445866 CCDC83Q8IWF9 413 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 PROCA1Q8NCQ7 364 aaPredicted RBP20.26■□□□□ 0.83
SGCE-206ENST00000445866 TANGO6Q9C0B7 1094 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 LAMA4Q16363 1823 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 RASSF10A6NK89 507 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 FAM155AB1AL88 458 aaPredicted RBP20.26■□□□□ 0.83
SGCE-206ENST00000445866 HTRA3P83110 453 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 CMTR1Q8N1G2 835 aaKnown RBP20.26■□□□□ 0.83
SGCE-206ENST00000445866 CHURC1Q8WUH1 139 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 GTF3C6Q969F1 213 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 LZTS2Q9BRK4 669 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 VAT1LQ9HCJ6 419 aa20.26■□□□□ 0.83
SGCE-206ENST00000445866 USP17L15C9J2P7 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L13C9JLJ4 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L11C9JVI0 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L18D6R9N7 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L22D6RA61 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L17D6RBQ6 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L19D6RCP7 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L20D6RJB6 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 SLC16A2P36021 539 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 C1QTNF8P60827 252 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 USP17L24Q0WX57 530 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 MOGSQ13724 837 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 TREML2Q5T2D2 321 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 CPLX2Q6PUV4 134 aaKnown RBP20.25■□□□□ 0.83
SGCE-206ENST00000445866 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 FEM1BQ9UK73 627 aa20.25■□□□□ 0.83
SGCE-206ENST00000445866 MANSC4A6NHS7 340 aaPredicted RBP20.24■□□□□ 0.83
SGCE-206ENST00000445866 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
SGCE-206ENST00000445866 SRBD1Q8N5C6 995 aaKnown RBP20.24■□□□□ 0.83
SGCE-206ENST00000445866 CAPNS2Q96L46 248 aa20.24■□□□□ 0.83
SGCE-206ENST00000445866 CPVLQ9H3G5 476 aa20.24■□□□□ 0.83
SGCE-206ENST00000445866 PPFIA3O75145 1194 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 INHBEP58166 350 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 GPAT2Q6NUI2 795 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 TMTC3Q6ZXV5 915 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 NBPF11Q86T75 865 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 FBXO28Q9NVF7 368 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 AGTPBP1Q9UPW5 1226 aa20.23■□□□□ 0.83
SGCE-206ENST00000445866 FLOT1O75955 427 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 STAT2P52630 851 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 PABPC4Q13310 644 aaKnown RBP eCLIP20.22■□□□□ 0.83
SGCE-206ENST00000445866 COG2Q14746 738 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 FAM160B2Q86V87 743 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 HOXC10Q9NYD6 342 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 BTBD19C9JJ37 291 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 PLA2G6O60733 806 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 DTNBO60941 627 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
SGCE-206ENST00000445866 KIF23Q02241 960 aaPredicted RBP20.22■□□□□ 0.83
SGCE-206ENST00000445866 SYDE2Q5VT97 1194 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 BTNL9Q6UXG8 535 aa20.22■□□□□ 0.83
SGCE-206ENST00000445866 PRPF38AQ8NAV1 312 aaKnown RBP20.22■□□□□ 0.83
SGCE-206ENST00000445866 PIBF1Q8WXW3 757 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms