RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 USP17L3A6NCW0 530 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 USP17L4A6NCW7 530 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 CTIFO43310 598 aaKnown RBP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 FMR1Q06787 632 aaKnown RBP eCLIP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 USP17L1Q7RTZ2 530 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 BLIDQ8IZY5 108 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 STAG2Q8N3U4 1231 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 DAGLBQ8NCG7 672 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 TBC1D16Q8TBP0 767 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 PAGE5Q96GU1 130 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 PYM1Q9BRP8 204 aaKnown RBP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 PCDHA4Q9UN74 947 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 MYH8P13535 1937 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 PALM3A6NDB9 673 aaPredicted RBP16.1■□□□□ 0.17
NCLP1-201ENST00000445357 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
NCLP1-201ENST00000445357 NRDCO43847 1150 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 CFAP100Q494V2 611 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 ARL6IP4Q66PJ3 421 aaKnown RBP16.1■□□□□ 0.17
NCLP1-201ENST00000445357 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 SLF2Q8IX21 1173 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 FLT1P17948 1338 aa16.1■□□□□ 0.17
NCLP1-201ENST00000445357 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
NCLP1-201ENST00000445357 M0R2N6 131 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 RHBDL3P58872 404 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 DPYDQ12882 1025 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 SLC35G1Q2M3R5 365 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 POLLQ9UGP5 575 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 VWA3AA6NCI4 1184 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
NCLP1-201ENST00000445357 CDK8P49336 464 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 PTPN14Q15678 1187 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 E2F4Q16254 413 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 MFSD14BQ5SR56 506 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 CEP135Q66GS9 1140 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 NEDD1Q8NHV4 660 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 MED15Q96RN5 788 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 INTS13Q9NVM9 706 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 SAP30BPQ9UHR5 308 aaKnown RBP16.09■□□□□ 0.17
NCLP1-201ENST00000445357 NFE2L3Q9Y4A8 694 aa16.09■□□□□ 0.17
NCLP1-201ENST00000445357 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
NCLP1-201ENST00000445357 E4F1Q66K89 784 aaPredicted RBP16.08■□□□□ 0.16
NCLP1-201ENST00000445357 C4orf32Q8N8J7 132 aa16.08■□□□□ 0.16
NCLP1-201ENST00000445357 CYTH3O43739 400 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 NOVP48745 357 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 IL17AQ16552 155 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 WWC2Q6AWC2 1192 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 TYW1BQ6NUM6 668 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 DEFB132Q7Z7B7 95 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.16
NCLP1-201ENST00000445357 SPZ1Q9BXG8 430 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 TMX1Q9H3N1 280 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
NCLP1-201ENST00000445357 MCM7P33993 719 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 LONP1P36776 959 aaKnown RBP16.07■□□□□ 0.16
NCLP1-201ENST00000445357 AFMP43652 599 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 TBX2Q13207 712 aaPredicted RBP16.07■□□□□ 0.16
NCLP1-201ENST00000445357 CUL4BQ13620 913 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 SYCP1Q15431 976 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 EYA3Q99504 573 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
NCLP1-201ENST00000445357 STXBP3O00186 592 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 SMARCA1P28370 1054 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
NCLP1-201ENST00000445357 TSC1Q92574 1164 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 STX8Q9UNK0 236 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 SUGT1Q9Y2Z0 365 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 PPEF1O14829 653 aaPredicted RBP16.06■□□□□ 0.16
NCLP1-201ENST00000445357 SPATA1Q5VX52 437 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 PPP1R13BQ96KQ4 1090 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 PCDHA6Q9UN73 950 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 PCDHA8Q9Y5H6 950 aa16.06■□□□□ 0.16
NCLP1-201ENST00000445357 CCDC194A0A1B0GVG4 234 aa16.05■□□□□ 0.16
NCLP1-201ENST00000445357 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
NCLP1-201ENST00000445357 TUBB4AP04350 444 aa16.05■□□□□ 0.16
NCLP1-201ENST00000445357 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
NCLP1-201ENST00000445357 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
NCLP1-201ENST00000445357 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
NCLP1-201ENST00000445357 DAGLAQ9Y4D2 1042 aa16.05■□□□□ 0.16
NCLP1-201ENST00000445357 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
NCLP1-201ENST00000445357 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
NCLP1-201ENST00000445357 SYNRGQ9UMZ2 1314 aa16.05■□□□□ 0.16
NCLP1-201ENST00000445357 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
NCLP1-201ENST00000445357 CCP110O43303 1012 aa16.04■□□□□ 0.16
NCLP1-201ENST00000445357 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms