RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TTLL1O95922 423 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 PTMAP06454 111 aaKnown RBP21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 ATP2B1P20020 1258 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 RBM5P52756 815 aaKnown RBP eCLIP21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 KRBA2Q6ZNG9 492 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 C11orf57Q6ZUT1 292 aaPredicted RBP21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 ZNF713Q8N859 430 aaPredicted RBP21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 RRP36Q96EU6 259 aaKnown RBP21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 BPIFA3Q9BQP9 254 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 TUBE1Q9UJT0 475 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 STXBP3O00186 592 aa21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 SNHG28P0DPA3 235 aa21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 VEGFAP15692 232 aaPredicted RBP21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 CLCN1P35523 988 aa21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 NLRP12P59046 1061 aa21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 ATP2C1P98194 919 aaPredicted RBP21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 SOGA3Q5TF21 947 aa21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 GPKOWQ92917 476 aaPredicted RBP eCLIP21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 PI4KBQ9UBF8 816 aa21.57■■□□□ 1.04
SEMA3D-202ENST00000444867 PDHBP11177 359 aa21.56■■□□□ 1.04
SEMA3D-202ENST00000444867 KANK3Q6NY19 840 aa21.56■■□□□ 1.04
SEMA3D-202ENST00000444867 PIK3AP1Q6ZUJ8 805 aa21.56■■□□□ 1.04
SEMA3D-202ENST00000444867 CNNM3Q8NE01 707 aa21.56■■□□□ 1.04
SEMA3D-202ENST00000444867 FAM198AQ9UFP1 575 aa21.56■■□□□ 1.04
SEMA3D-202ENST00000444867 MTMR7Q9Y216 660 aa21.56■■□□□ 1.04
SEMA3D-202ENST00000444867 YDJCA8MPS7 323 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 M0R2N6 131 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 AP5Z1O43299 807 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 ENTPD3O75355 529 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 ZBTB7AO95365 584 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 GOLGA8HP0CJ92 632 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 MSNP26038 577 aaKnown RBP21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 PLCB2Q00722 1185 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 USP17L2Q6R6M4 530 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 HEATR3Q7Z4Q2 680 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 FOXP4Q8IVH2 680 aaPredicted RBP21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 RIOX1Q9H6W3 641 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 RTN4Q9NQC3 1192 aaKnown RBP21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 SEC63Q9UGP8 760 aaKnown RBP21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 USP17L5A8MUK1 530 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 BECN2A8MW95 431 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 DPEP1P16444 411 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 KCNA3P22001 575 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 LONRF3Q496Y0 759 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 CCDC34Q96HJ3 373 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 CSRNP2Q9H175 543 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 ZKSCAN5Q9Y2L8 839 aa21.55■■□□□ 1.04
SEMA3D-202ENST00000444867 ATRNL1Q5VV63 1379 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 TPM3P06753 285 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 GRIN1Q05586 938 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 ZNF174Q15697 407 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 TYW1BQ6NUM6 668 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 SARM1Q6SZW1 724 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 ZMYND12Q9H0C1 365 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 CLIP2Q9UDT6 1046 aa21.54■■□□□ 1.04
SEMA3D-202ENST00000444867 CCDC194A0A1B0GVG4 234 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 ESYT2A0FGR8 921 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 GOLGA6L6A8MZA4 724 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 GNA11P29992 359 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 CFAP100Q494V2 611 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 ARL6IP4Q66PJ3 421 aaKnown RBP21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 RSBN1LQ6PCB5 846 aaPredicted RBP21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 METTL16Q86W50 562 aaKnown RBP21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 ZFPM1Q8IX07 1006 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 ERCC4Q92889 916 aaPredicted RBP21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 TRIM34Q9BYJ4 488 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 C6orf50Q9HD87 102 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 PCDHA6Q9UN73 950 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 PCDHA8Q9Y5H6 950 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 SRCAPQ6ZRS2 3230 aa21.53■■□□□ 1.04
SEMA3D-202ENST00000444867 NAPAP54920 295 aa21.52■■□□□ 1.04
SEMA3D-202ENST00000444867 PTGDRQ13258 359 aa21.52■■□□□ 1.04
SEMA3D-202ENST00000444867 GPATCH4Q5T3I0 446 aaKnown RBP21.52■■□□□ 1.04
SEMA3D-202ENST00000444867 DHX40Q8IX18 779 aaKnown RBP21.52■■□□□ 1.04
SEMA3D-202ENST00000444867 LRRC47Q8N1G4 583 aaKnown RBP21.52■■□□□ 1.04
SEMA3D-202ENST00000444867 PCDHAC2Q9Y5I4 1007 aa21.52■■□□□ 1.04
SEMA3D-202ENST00000444867 DDTLA6NHG4 134 aaPredicted RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 POLR2DO15514 142 aaKnown RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 VIL1P09327 827 aaKnown RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 TGFB2P61812 414 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 ZNF543Q08ER8 600 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 TCP10Q12799 353 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 SPECC1Q5M775 1068 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 TATDN1Q6P1N9 297 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 PLA2G4DQ86XP0 818 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 ZSCAN29Q8IWY8 852 aaPredicted RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 LARGE2Q8N3Y3 721 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 PYM1Q9BRP8 204 aaKnown RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 DNAJC18Q9H819 358 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 ATF5Q9Y2D1 282 aaPredicted RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 MPHOSPH10O00566 681 aaKnown RBP21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 WNT7AO00755 349 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 CDC25BP30305 580 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 ZNF75DP51815 510 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 CACNB3P54284 484 aa21.51■■□□□ 1.03
SEMA3D-202ENST00000444867 MDM2Q00987 491 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms