RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 PRC1O43663 620 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 NOVP48745 357 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 CCNA1P78396 465 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 FAM160B2Q86V87 743 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 ANKRD13CQ8N6S4 541 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
SSBP3-208ENST00000444533 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
SSBP3-208ENST00000444533 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
SSBP3-208ENST00000444533 MYH4Q9Y623 1939 aa16.52■□□□□ 0.23
SSBP3-208ENST00000444533 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 STAT2P52630 851 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 FAM110CQ1W6H9 321 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 C17orf99Q6UX52 265 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 STOX1Q6ZVD7 989 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 CYB5R4Q7L1T6 521 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 CATIPQ7Z7H3 387 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
SSBP3-208ENST00000444533 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
SSBP3-208ENST00000444533 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
SSBP3-208ENST00000444533 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 JAKMIP1Q96N16 626 aaKnown RBP16.51■□□□□ 0.23
SSBP3-208ENST00000444533 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
SSBP3-208ENST00000444533 ZBED4O75132 1171 aa16.5■□□□□ 0.23
SSBP3-208ENST00000444533 FDX1P10109 184 aa16.5■□□□□ 0.23
SSBP3-208ENST00000444533 HOXD10P28358 340 aa16.5■□□□□ 0.23
SSBP3-208ENST00000444533 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
SSBP3-208ENST00000444533 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
SSBP3-208ENST00000444533 CHST3Q7LGC8 479 aa16.5■□□□□ 0.23
SSBP3-208ENST00000444533 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
SSBP3-208ENST00000444533 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
SSBP3-208ENST00000444533 TAF6LQ9Y6J9 622 aa16.5■□□□□ 0.23
SSBP3-208ENST00000444533 WDR19Q8NEZ3 1342 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 DSG3P32926 999 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 FCGRTP55899 365 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 KIAA1755Q5JYT7 1200 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 LBX2Q6XYB7 198 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 KCNB2Q92953 911 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 KIFC2Q96AC6 838 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 R3HDMLQ9H3Y0 253 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
SSBP3-208ENST00000444533 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-208ENST00000444533 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-208ENST00000444533 GNRH1P01148 92 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
SSBP3-208ENST00000444533 PDHBP11177 359 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
SSBP3-208ENST00000444533 ANAPC15P60006 121 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-208ENST00000444533 PLS1Q14651 629 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
SSBP3-208ENST00000444533 ADGRA2Q96PE1 1338 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 PLA2G6O60733 806 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 CALM1P0DP23 149 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 CALM2P0DP24 149 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 CALM3P0DP25 149 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 BCRP11274 1271 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 ERVK-9P63128 1117 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 ERVK-24P63145 666 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 SEC23AQ15436 765 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 COA7Q96BR5 231 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 MORF4L1Q9UBU8 362 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
SSBP3-208ENST00000444533 FRMPD2Q68DX3 1309 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-208ENST00000444533 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
SSBP3-208ENST00000444533 MAPK4P31152 587 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 KIF5BP33176 963 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 COPB2P35606 906 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 LIFRP42702 1097 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 PSMC4P43686 418 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 ZNF543Q08ER8 600 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
SSBP3-208ENST00000444533 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 CTCFLQ8NI51 663 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-208ENST00000444533 CD99L2Q8TCZ2 262 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 ATG4CQ96DT6 458 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 FBXO28Q9NVF7 368 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-208ENST00000444533 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
SSBP3-208ENST00000444533 VWA5AO00534 786 aa16.45■□□□□ 0.22
SSBP3-208ENST00000444533 SH2B2O14492 632 aaPredicted RBP16.45■□□□□ 0.22
SSBP3-208ENST00000444533 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms