RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 STK3Q13188 491 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 VGLL4Q14135 290 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 KIF22Q14807 665 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 NECAB1Q8N987 351 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 BRI3BPQ8WY22 251 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 TMEM47Q9BQJ4 181 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 ZNF341Q9BYN7 854 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 ZNF112Q9UJU3 913 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 STX8Q9UNK0 236 aa15.68■□□□□ 0.1
SF1-210ENST00000443908 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 PHF20L1A8MW92 1017 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 MPHOSPH10O00566 681 aaKnown RBP15.67■□□□□ 0.1
SF1-210ENST00000443908 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
SF1-210ENST00000443908 GUCY1A2P33402 732 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 CAP2P40123 477 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 RRP1BQ14684 758 aaKnown RBP15.67■□□□□ 0.1
SF1-210ENST00000443908 SLC9C1Q4G0N8 1177 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 MICU3Q86XE3 530 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 SMARCC2Q8TAQ2 1214 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 MKL1Q969V6 931 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 RBM28Q9NW13 759 aaKnown RBP15.67■□□□□ 0.1
SF1-210ENST00000443908 ZBTB21Q9ULJ3 1066 aa15.67■□□□□ 0.1
SF1-210ENST00000443908 CIZ1Q9ULV3 898 aaPredicted RBP15.67■□□□□ 0.1
SF1-210ENST00000443908 NAP1L2Q9ULW6 460 aaPredicted RBP15.67■□□□□ 0.1
SF1-210ENST00000443908 CDKL5O76039 1030 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 GDF11O95390 407 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 GH2P01242 217 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 ASNSP08243 561 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 CETPP11597 493 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
SF1-210ENST00000443908 RTN1Q16799 776 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
SF1-210ENST00000443908 MIGA2Q7L4E1 593 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 FAM43AQ8N2R8 423 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 FANCBQ8NB91 859 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.66■□□□□ 0.16e-7■■■□□ 14.8
SF1-210ENST00000443908 ZKSCAN4Q969J2 545 aaPredicted RBP15.66■□□□□ 0.1
SF1-210ENST00000443908 ARMC5Q96C12 935 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
SF1-210ENST00000443908 CTNND1O60716 968 aaKnown RBP15.65■□□□□ 0.1
SF1-210ENST00000443908 PDIA4P13667 645 aaKnown RBP15.65■□□□□ 0.1
SF1-210ENST00000443908 KIF5BP33176 963 aa15.65■□□□□ 0.1
SF1-210ENST00000443908 CCT2P78371 535 aaKnown RBP15.65■□□□□ 0.1
SF1-210ENST00000443908 ICA1Q05084 483 aa15.65■□□□□ 0.1
SF1-210ENST00000443908 SEPT2Q15019 361 aa15.65■□□□□ 0.1
SF1-210ENST00000443908 NSUN7Q8NE18 718 aaKnown RBP15.65■□□□□ 0.1
SF1-210ENST00000443908 WRNIP1Q96S55 665 aa15.65■□□□□ 0.1
SF1-210ENST00000443908 MYL10Q9BUA6 226 aa15.65■□□□□ 0.1
SF1-210ENST00000443908 NCOA5Q9HCD5 579 aaKnown RBP15.65■□□□□ 0.1
SF1-210ENST00000443908 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
SF1-210ENST00000443908 PTCH2Q9Y6C5 1203 aa15.65■□□□□ 0.1
SF1-210ENST00000443908 CPLX1O14810 134 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 CTDNEP1O95476 244 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 IFNAR1P17181 557 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 JAG1P78504 1218 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 CAP1Q01518 475 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 SNAPC2Q13487 334 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 DOCK1Q14185 1865 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 GRM4Q14833 912 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
SF1-210ENST00000443908 NOL9Q5SY16 702 aaKnown RBP15.64■□□□□ 0.09
SF1-210ENST00000443908 ERO1BQ86YB8 467 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 CTCFLQ8NI51 663 aaPredicted RBP15.64■□□□□ 0.09
SF1-210ENST00000443908 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 KIF3AQ9Y496 699 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 KIAA0100Q14667 2235 aaKnown RBP15.64■□□□□ 0.09
SF1-210ENST00000443908 STK36Q9NRP7 1315 aa15.64■□□□□ 0.09
SF1-210ENST00000443908 PTPDC1A2A3K4 754 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
SF1-210ENST00000443908 RXRAP19793 462 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 CDC27P30260 824 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 GNAQP50148 359 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 NTRK3Q16288 839 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 SHROOM1Q2M3G4 852 aaPredicted RBP15.63■□□□□ 0.09
SF1-210ENST00000443908 SIAH1Q8IUQ4 282 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 SPRYD3Q8NCJ5 442 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 GMCL1P1Q8NEA9 526 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 NUP133Q8WUM0 1156 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 ZNF333Q96JL9 665 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 ARHGEF10LQ9HCE6 1279 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 ATAD5Q96QE3 1844 aa15.63■□□□□ 0.09
SF1-210ENST00000443908 BTBD19C9JJ37 291 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 IRF6O14896 467 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 TLR2O60603 784 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 GJB2P29033 226 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 ADD1P35611 737 aaKnown RBP15.62■□□□□ 0.09
SF1-210ENST00000443908 RAB3GAP1Q15042 981 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 TMTC3Q6ZXV5 915 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 RAB11FIP4Q86YS3 637 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 CLEC10AQ8IUN9 316 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 SCYL3Q8IZE3 742 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 RGS22Q8NE09 1264 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 CHMP5Q9NZZ3 219 aa15.62■□□□□ 0.09
SF1-210ENST00000443908 PALM3A6NDB9 673 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms