RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FAM47AQ5JRC9 791 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 VPS53Q5VIR6 699 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 MFSD14CQ5VZR4 134 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 DPP9Q86TI2 863 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 PLEKHM2Q8IWE5 1019 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 CEP95Q96GE4 821 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 NUP88Q99567 741 aaPredicted RBP23.86■■□□□ 1.41
LRCH3-208ENST00000443727 CRISPLD2Q9H0B8 497 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 MROH8Q9H579 483 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 IGKV6D-41A0A0C4DH26 115 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 A0A0D9SFI3 127 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 STRNO43815 780 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 TTLL1O95922 423 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 IRX6P78412 446 aaPredicted RBP23.85■■□□□ 1.41
LRCH3-208ENST00000443727 CTDSPL2Q05D32 466 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 CACNB2Q08289 660 aaPredicted RBP23.85■■□□□ 1.41
LRCH3-208ENST00000443727 NMIQ13287 307 aaPredicted RBP23.85■■□□□ 1.41
LRCH3-208ENST00000443727 MAP3K21Q5TCX8 1036 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 NEDD1Q8NHV4 660 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 MTMR4Q9NYA4 1195 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 PPP1R9AQ9ULJ8 1098 aa23.85■■□□□ 1.41
LRCH3-208ENST00000443727 NDUFB10O96000 172 aa23.84■■□□□ 1.41
LRCH3-208ENST00000443727 ADORA2AP29274 412 aa23.84■■□□□ 1.41
LRCH3-208ENST00000443727 UBE2Q1Q7Z7E8 422 aa23.84■■□□□ 1.41
LRCH3-208ENST00000443727 SLF1Q9BQI6 1058 aa23.84■■□□□ 1.41
LRCH3-208ENST00000443727 VWA5AO00534 786 aa23.83■■□□□ 1.41
LRCH3-208ENST00000443727 FOXP2O15409 715 aa23.83■■□□□ 1.41
LRCH3-208ENST00000443727 SLC25A27O95847 323 aa23.83■■□□□ 1.41
LRCH3-208ENST00000443727 TMEM132BQ14DG7 1078 aa23.83■■□□□ 1.41
LRCH3-208ENST00000443727 LRRC47Q8N1G4 583 aaKnown RBP23.83■■□□□ 1.41
LRCH3-208ENST00000443727 OSBPL3Q9H4L5 887 aa23.83■■□□□ 1.41
LRCH3-208ENST00000443727 SLC5A4Q9NY91 659 aa23.83■■□□□ 1.41
LRCH3-208ENST00000443727 ISY1Q9ULR0 285 aaKnown RBP23.83■■□□□ 1.41
LRCH3-208ENST00000443727 CTDP1Q9Y5B0 961 aaPredicted RBP23.83■■□□□ 1.41
LRCH3-208ENST00000443727 TSPY2A6NKD2 308 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 HOXC6P09630 235 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 ALX1Q15699 326 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 MKL1Q969V6 931 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 FLRT1Q9NZU1 646 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 SYNPO2Q9UMS6 1093 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 ADAMTS5Q9UNA0 930 aa23.82■■□□□ 1.4
LRCH3-208ENST00000443727 GREB1LQ9C091 1923 aaPredicted RBP23.82■■□□□ 1.4
LRCH3-208ENST00000443727 PLIN4Q96Q06 1357 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 RLFQ13129 1914 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 RANBP6O60518 1105 aaKnown RBP23.81■■□□□ 1.4
LRCH3-208ENST00000443727 FCER1AP12319 257 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 SDSP20132 328 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 CCND3P30281 292 aaPredicted RBP23.81■■□□□ 1.4
LRCH3-208ENST00000443727 STAT3P40763 770 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 MFAP1P55081 439 aaKnown RBP23.81■■□□□ 1.4
LRCH3-208ENST00000443727 NECAB2Q7Z6G3 386 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 ANKLE1Q8NAG6 615 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 NPLOC4Q8TAT6 608 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 PAWRQ96IZ0 340 aaKnown RBP23.81■■□□□ 1.4
LRCH3-208ENST00000443727 TOMM22Q9NS69 142 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 CCDC171Q6TFL3 1326 aa23.81■■□□□ 1.4
LRCH3-208ENST00000443727 A0A0G2JMZ2 1700 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 H0YGN5 161 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 ZNF589Q86UQ0 364 aaPredicted RBP23.8■■□□□ 1.4
LRCH3-208ENST00000443727 ABRAQ8N0Z2 381 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 PRPF38AQ8NAV1 312 aaKnown RBP23.8■■□□□ 1.4
LRCH3-208ENST00000443727 INCENPQ9NQS7 918 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 DIAPH3Q9NSV4 1193 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 ANAPC4Q9UJX5 808 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 STX8Q9UNK0 236 aa23.8■■□□□ 1.4
LRCH3-208ENST00000443727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
LRCH3-208ENST00000443727 FGAP02671 866 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 HSPD1P10809 573 aaKnown RBP23.79■■□□□ 1.4
LRCH3-208ENST00000443727 CNGA1P29973 690 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 CYP2C19P33261 490 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 COPB2P35606 906 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 SLFN13Q68D06 897 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 RIOX2Q8IUF8 465 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 GMCL1P1Q8NEA9 526 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 DIS3LQ8TF46 1054 aaKnown RBP23.79■■□□□ 1.4
LRCH3-208ENST00000443727 KIFC2Q96AC6 838 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 MMP19Q99542 508 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 NR2E3Q9Y5X4 410 aa23.79■■□□□ 1.4
LRCH3-208ENST00000443727 ZBED4O75132 1171 aa23.78■■□□□ 1.4
LRCH3-208ENST00000443727 KCTD2Q14681 263 aa23.78■■□□□ 1.4
LRCH3-208ENST00000443727 RRP12Q5JTH9 1297 aaKnown RBP23.78■■□□□ 1.4
LRCH3-208ENST00000443727 NBPF3Q9H094 633 aa23.78■■□□□ 1.4
LRCH3-208ENST00000443727 FEM1BQ9UK73 627 aa23.78■■□□□ 1.4
LRCH3-208ENST00000443727 OGDHLQ9ULD0 1010 aa23.78■■□□□ 1.4
LRCH3-208ENST00000443727 HIP1O00291 1037 aa23.77■■□□□ 1.4
LRCH3-208ENST00000443727 COBLO75128 1261 aa23.77■■□□□ 1.4
LRCH3-208ENST00000443727 BMP3P12645 472 aa23.77■■□□□ 1.4
LRCH3-208ENST00000443727 SLC4A3P48751 1232 aa23.77■■□□□ 1.4
LRCH3-208ENST00000443727 OLFML2BQ68BL8 750 aa23.77■■□□□ 1.4
LRCH3-208ENST00000443727 CWC27Q6UX04 472 aaKnown RBP23.77■■□□□ 1.4
LRCH3-208ENST00000443727 TEX13BQ9BXU2 312 aa23.77■■□□□ 1.4
LRCH3-208ENST00000443727 ZNF214Q9UL59 606 aaPredicted RBP23.77■■□□□ 1.4
LRCH3-208ENST00000443727 ORC4O43929 436 aa23.76■■□□□ 1.39
LRCH3-208ENST00000443727 EVI5O60447 810 aa23.76■■□□□ 1.39
LRCH3-208ENST00000443727 IKQ13123 557 aaPredicted RBP23.76■■□□□ 1.39
LRCH3-208ENST00000443727 SNRNP48Q6IEG0 339 aaKnown RBP23.76■■□□□ 1.39
LRCH3-208ENST00000443727 CPXCR1Q8N123 301 aa23.76■■□□□ 1.39
LRCH3-208ENST00000443727 REPS2Q8NFH8 660 aa23.76■■□□□ 1.39
LRCH3-208ENST00000443727 CHMP4CQ96CF2 233 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms