RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TNS4Q8IZW8 715 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 ZSCAN10Q96SZ4 725 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-211ENST00000443563 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 ZSWIM5Q9P217 1185 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 FEM1BQ9UK73 627 aa12.74□□□□□ -0.37
HDAC6-211ENST00000443563 TNKSO95271 1327 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 ERICH2A1L162 156 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 SLC27A2O14975 620 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 FDX1P10109 184 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-211ENST00000443563 MAPK4P31152 587 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 SLC1A4P43007 532 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 KRT32Q14532 448 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 FBXO46Q6PJ61 603 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-211ENST00000443563 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 PRPF38AQ8NAV1 312 aaKnown RBP12.73□□□□□ -0.37
HDAC6-211ENST00000443563 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 COA7Q96BR5 231 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 TMEM47Q9BQJ4 181 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 RBPJLQ9UBG7 517 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
HDAC6-211ENST00000443563 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-211ENST00000443563 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 HTTP42858 3142 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
HDAC6-211ENST00000443563 PLA2G6O60733 806 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 STAT2P52630 851 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 IKQ13123 557 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-211ENST00000443563 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
HDAC6-211ENST00000443563 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 SLF1Q9BQI6 1058 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 MTA3Q9BTC8 594 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 MCOLN1Q9GZU1 580 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
HDAC6-211ENST00000443563 ISY1Q9ULR0 285 aaKnown RBP12.72□□□□□ -0.37
HDAC6-211ENST00000443563 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
HDAC6-211ENST00000443563 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-211ENST00000443563 ZBED4O75132 1171 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 MCCP23508 829 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 MCM5P33992 734 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-211ENST00000443563 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-211ENST00000443563 PNMA1Q8ND90 353 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 ATG4CQ96DT6 458 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 NUP88Q99567 741 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-211ENST00000443563 ARHGAP39Q9C0H5 1083 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 TXNRD2Q9NNW7 524 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 SRRDQ9UH36 339 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.37
HDAC6-211ENST00000443563 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 VWA5AO00534 786 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 IFIT3O14879 490 aaKnown RBP12.7□□□□□ -0.38
HDAC6-211ENST00000443563 CNMDO75829 334 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 SLC25A27O95847 323 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
HDAC6-211ENST00000443563 COPB2P35606 906 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 WTAPQ15007 396 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 GPATCH4Q5T3I0 446 aaKnown RBP12.7□□□□□ -0.38
HDAC6-211ENST00000443563 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 CYB5R4Q7L1T6 521 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 SPATC1LQ9H0A9 340 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 CENPFP49454 3210 aa12.7□□□□□ -0.38
HDAC6-211ENST00000443563 PDHBP11177 359 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 PLS1Q14651 629 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 SEC23AQ15436 765 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 Q3C1V9 767 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 NBPF11Q86T75 865 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 MB21D2Q8IYB1 491 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-211ENST00000443563 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 SHCBP1Q8NEM2 672 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 MROH8Q9H579 483 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 TAF6LQ9Y6J9 622 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
HDAC6-211ENST00000443563 ATP2A1O14983 1001 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 PRC1O43663 620 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 STRNO43815 780 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-211ENST00000443563 SNHG28P0DPA3 235 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 CTGFP29279 349 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 HSPA4P34932 840 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 OAZ1P54368 228 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 ZNF543Q08ER8 600 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms