RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 MKL1Q969V6 931 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 NUP88Q99567 741 aaPredicted RBP26.28■■□□□ 1.8
HDLBP-220ENST00000442730 APBA2Q99767 749 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 INCENPQ9NQS7 918 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 PAK6Q9NQU5 681 aaPredicted RBP26.28■■□□□ 1.8
HDLBP-220ENST00000442730 SYNPO2Q9UMS6 1093 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 F5H6K3 240 aa26.27■■□□□ 1.8
HDLBP-220ENST00000442730 KLRC3Q07444 240 aa26.27■■□□□ 1.8
HDLBP-220ENST00000442730 TRIM32Q13049 653 aa26.27■■□□□ 1.8
HDLBP-220ENST00000442730 LRRC47Q8N1G4 583 aaKnown RBP26.27■■□□□ 1.8
HDLBP-220ENST00000442730 DIAPH3Q9NSV4 1193 aa26.27■■□□□ 1.8
HDLBP-220ENST00000442730 PPP1R9AQ9ULJ8 1098 aa26.27■■□□□ 1.8
HDLBP-220ENST00000442730 ADAMTS5Q9UNA0 930 aa26.27■■□□□ 1.8
HDLBP-220ENST00000442730 MYH4Q9Y623 1939 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 ZNF236Q9UL36 1845 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 SLC15A5A6NIM6 579 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 ORC4O43929 436 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 FGRP09769 529 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 GSPT1P15170 499 aaKnown RBP26.26■■□□□ 1.79
HDLBP-220ENST00000442730 PTPREP23469 700 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 MAP2K5Q13163 448 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 GRB14Q14449 540 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 SAMD1Q6SPF0 538 aaPredicted RBP26.26■■□□□ 1.79
HDLBP-220ENST00000442730 CWC27Q6UX04 472 aaKnown RBP26.26■■□□□ 1.79
HDLBP-220ENST00000442730 SHCBP1Q8NEM2 672 aa26.26■■□□□ 1.79
HDLBP-220ENST00000442730 U2AF1L4Q8WU68 220 aaKnown RBP26.26■■□□□ 1.79
HDLBP-220ENST00000442730 HIP1O00291 1037 aa26.25■■□□□ 1.79
HDLBP-220ENST00000442730 ZKSCAN1P17029 563 aaPredicted RBP26.25■■□□□ 1.79
HDLBP-220ENST00000442730 MFAP1P55081 439 aaKnown RBP26.25■■□□□ 1.79
HDLBP-220ENST00000442730 TTC22Q5TAA0 569 aa26.25■■□□□ 1.79
HDLBP-220ENST00000442730 GMCL1P1Q8NEA9 526 aa26.25■■□□□ 1.79
HDLBP-220ENST00000442730 IVNS1ABPQ9Y6Y0 642 aa26.25■■□□□ 1.79
HDLBP-220ENST00000442730 ERCC3P19447 782 aa26.24■■□□□ 1.79
HDLBP-220ENST00000442730 TMEM132BQ14DG7 1078 aa26.24■■□□□ 1.79
HDLBP-220ENST00000442730 CCL14Q16627 93 aa26.24■■□□□ 1.79
HDLBP-220ENST00000442730 MAP3K21Q5TCX8 1036 aa26.24■■□□□ 1.79
HDLBP-220ENST00000442730 TRMT44Q8IYL2 757 aaKnown RBP26.24■■□□□ 1.79
HDLBP-220ENST00000442730 NBPF3Q9H094 633 aa26.24■■□□□ 1.79
HDLBP-220ENST00000442730 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.24■■□□□ 1.79
HDLBP-220ENST00000442730 TSPY2A6NKD2 308 aa26.23■■□□□ 1.79
HDLBP-220ENST00000442730 VWA5AO00534 786 aa26.23■■□□□ 1.79
HDLBP-220ENST00000442730 PLS1Q14651 629 aa26.23■■□□□ 1.79
HDLBP-220ENST00000442730 DEFB118Q96PH6 123 aa26.23■■□□□ 1.79
HDLBP-220ENST00000442730 SLF1Q9BQI6 1058 aa26.23■■□□□ 1.79
HDLBP-220ENST00000442730 IL17RBQ9NRM6 502 aa26.23■■□□□ 1.79
HDLBP-220ENST00000442730 RANBP6O60518 1105 aaKnown RBP26.22■■□□□ 1.79
HDLBP-220ENST00000442730 NMT2O60551 498 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 SGPL1O95470 568 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 HOXC6P09630 235 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 PRKAR2AP13861 404 aaKnown RBP26.22■■□□□ 1.79
HDLBP-220ENST00000442730 HAND2P61296 217 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 PPP4R3BQ5MIZ7 849 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 REPS2Q8NFH8 660 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 MROH8Q9H579 483 aa26.22■■□□□ 1.79
HDLBP-220ENST00000442730 COL11A1P12107 1806 aaPredicted RBP26.22■■□□□ 1.79
HDLBP-220ENST00000442730 LAMA4Q16363 1823 aa26.21■■□□□ 1.79
HDLBP-220ENST00000442730 RPTORQ8N122 1335 aa26.21■■□□□ 1.79
HDLBP-220ENST00000442730 UBE2Q1Q7Z7E8 422 aa26.21■■□□□ 1.79
HDLBP-220ENST00000442730 TBC1D10CQ8IV04 446 aa26.21■■□□□ 1.79
HDLBP-220ENST00000442730 ZNF214Q9UL59 606 aaPredicted RBP26.21■■□□□ 1.79
HDLBP-220ENST00000442730 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
HDLBP-220ENST00000442730 ADORA2AP29274 412 aa26.2■■□□□ 1.78
HDLBP-220ENST00000442730 NCAPG2Q86XI2 1143 aa26.2■■□□□ 1.78
HDLBP-220ENST00000442730 CRISPLD2Q9H0B8 497 aa26.2■■□□□ 1.78
HDLBP-220ENST00000442730 HMX1Q9NP08 348 aaPredicted RBP26.2■■□□□ 1.78
HDLBP-220ENST00000442730 FLRT1Q9NZU1 646 aa26.2■■□□□ 1.78
HDLBP-220ENST00000442730 STX8Q9UNK0 236 aa26.2■■□□□ 1.78
HDLBP-220ENST00000442730 STRNO43815 780 aa26.19■■□□□ 1.78
HDLBP-220ENST00000442730 NOVP48745 357 aa26.19■■□□□ 1.78
HDLBP-220ENST00000442730 PRPF38BQ5VTL8 546 aaKnown RBP26.19■■□□□ 1.78
HDLBP-220ENST00000442730 SLFN13Q68D06 897 aa26.19■■□□□ 1.78
HDLBP-220ENST00000442730 RIOX2Q8IUF8 465 aa26.19■■□□□ 1.78
HDLBP-220ENST00000442730 IL25Q9H293 177 aa26.19■■□□□ 1.78
HDLBP-220ENST00000442730 TOMM22Q9NS69 142 aa26.19■■□□□ 1.78
HDLBP-220ENST00000442730 SLC25A27O95847 323 aa26.18■■□□□ 1.78
HDLBP-220ENST00000442730 CACNB2Q08289 660 aaPredicted RBP26.18■■□□□ 1.78
HDLBP-220ENST00000442730 ABRAQ8N0Z2 381 aa26.18■■□□□ 1.78
HDLBP-220ENST00000442730 PRPF38AQ8NAV1 312 aaKnown RBP26.18■■□□□ 1.78
HDLBP-220ENST00000442730 NPLOC4Q8TAT6 608 aa26.18■■□□□ 1.78
HDLBP-220ENST00000442730 STAG1Q8WVM7 1258 aa26.18■■□□□ 1.78
HDLBP-220ENST00000442730 GMCL1Q96IK5 515 aa26.18■■□□□ 1.78
HDLBP-220ENST00000442730 FARP2O94887 1054 aaPredicted RBP26.17■■□□□ 1.78
HDLBP-220ENST00000442730 PCP11498 1178 aaKnown RBP26.17■■□□□ 1.78
HDLBP-220ENST00000442730 BMP3P12645 472 aa26.17■■□□□ 1.78
HDLBP-220ENST00000442730 STAT3P40763 770 aa26.17■■□□□ 1.78
HDLBP-220ENST00000442730 RRP12Q5JTH9 1297 aaKnown RBP26.17■■□□□ 1.78
HDLBP-220ENST00000442730 AKNAD1Q5T1N1 836 aa26.17■■□□□ 1.78
HDLBP-220ENST00000442730 DSCC1Q9BVC3 393 aa26.17■■□□□ 1.78
HDLBP-220ENST00000442730 FEM1BQ9UK73 627 aa26.17■■□□□ 1.78
HDLBP-220ENST00000442730 IGHA2P01877 340 aa26.16■■□□□ 1.78
HDLBP-220ENST00000442730 TFRCP02786 760 aaKnown RBP26.16■■□□□ 1.78
HDLBP-220ENST00000442730 CAPN2P17655 700 aa26.16■■□□□ 1.78
HDLBP-220ENST00000442730 KIFC2Q96AC6 838 aa26.16■■□□□ 1.78
HDLBP-220ENST00000442730 TEX13BQ9BXU2 312 aa26.16■■□□□ 1.78
HDLBP-220ENST00000442730 NEDD4P46934 1319 aa26.15■■□□□ 1.78
HDLBP-220ENST00000442730 COBLO75128 1261 aa26.15■■□□□ 1.78
HDLBP-220ENST00000442730 COPB2P35606 906 aa26.15■■□□□ 1.78
HDLBP-220ENST00000442730 MFSD6Q6ZSS7 791 aa26.15■■□□□ 1.78
HDLBP-220ENST00000442730 RASGRP2Q7LDG7 609 aa26.15■■□□□ 1.78
HDLBP-220ENST00000442730 DPP9Q86TI2 863 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms