RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
GACAT3-202ENST00000442387 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
GACAT3-202ENST00000442387 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
GACAT3-202ENST00000442387 MMP19Q99542 508 aa13.23□□□□□ -0.29
GACAT3-202ENST00000442387 COL25A1Q9BXS0 654 aaPredicted RBP13.23□□□□□ -0.29
GACAT3-202ENST00000442387 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.23□□□□□ -0.29
GACAT3-202ENST00000442387 XPNPEP3Q9NQH7 507 aa13.23□□□□□ -0.29
GACAT3-202ENST00000442387 LAMA2P24043 3122 aaKnown RBP13.23□□□□□ -0.29
GACAT3-202ENST00000442387 CYP2D7A0A087X1C5 515 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 MS4A1P11836 297 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
GACAT3-202ENST00000442387 KCTD2Q14681 263 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 RNF180Q86T96 592 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
GACAT3-202ENST00000442387 YTHDC1Q96MU7 727 aaKnown RBP13.22□□□□□ -0.29
GACAT3-202ENST00000442387 CDX2Q99626 313 aaPredicted RBP13.22□□□□□ -0.29
GACAT3-202ENST00000442387 TINF2Q9BSI4 451 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 BOLA2Q9H3K6 86 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 SEMA6BQ9H3T3 888 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 PHF24Q9UPV7 400 aa13.22□□□□□ -0.29
GACAT3-202ENST00000442387 LTBP2Q14767 1821 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 USP17L12C9JPN9 530 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 USP17L21D6R901 530 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 RAD21O60216 631 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 PGK2P07205 417 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 ATP5JP18859 108 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 COPB2P35606 906 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 STAT3P40763 770 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 SMAD3P84022 425 aaKnown RBP13.21□□□□□ -0.29
GACAT3-202ENST00000442387 TLE2Q04725 743 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 DIS3Q9Y2L1 958 aaKnown RBP13.21□□□□□ -0.29
GACAT3-202ENST00000442387 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
GACAT3-202ENST00000442387 VWA5AO00534 786 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 PGK1P00558 417 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 CLTBP09497 229 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 AKR1A1P14550 325 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 ZNF792Q3KQV3 632 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 SIRT2Q8IXJ6 389 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 HAUS7Q99871 368 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 ROBO3Q96MS0 1386 aa13.2□□□□□ -0.3
GACAT3-202ENST00000442387 RLFQ13129 1914 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 ZBED9Q6R2W3 1325 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
GACAT3-202ENST00000442387 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 CHGBP05060 677 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 ZNF865P0CJ78 1059 aaPredicted RBP13.19□□□□□ -0.3
GACAT3-202ENST00000442387 TAL1P17542 331 aaPredicted RBP13.19□□□□□ -0.3
GACAT3-202ENST00000442387 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 REPS2Q8NFH8 660 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 MAFAQ8NHW3 353 aaPredicted RBP13.19□□□□□ -0.3
GACAT3-202ENST00000442387 ZNF214Q9UL59 606 aaPredicted RBP13.19□□□□□ -0.3
GACAT3-202ENST00000442387 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
GACAT3-202ENST00000442387 KIAA0355O15063 1070 aa13.18□□□□□ -0.3
GACAT3-202ENST00000442387 PQBP1O60828 265 aaKnown RBP13.18□□□□□ -0.3
GACAT3-202ENST00000442387 RAG1P15918 1043 aa13.18□□□□□ -0.3
GACAT3-202ENST00000442387 ITGB8P26012 769 aa13.18□□□□□ -0.3
GACAT3-202ENST00000442387 MYLIPQ8WY64 445 aa13.18□□□□□ -0.3
GACAT3-202ENST00000442387 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
GACAT3-202ENST00000442387 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
GACAT3-202ENST00000442387 TTYH1Q9H313 450 aaPredicted RBP13.18□□□□□ -0.3
GACAT3-202ENST00000442387 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
GACAT3-202ENST00000442387 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
GACAT3-202ENST00000442387 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
GACAT3-202ENST00000442387 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
GACAT3-202ENST00000442387 FOSL2P15408 326 aa13.17□□□□□ -0.3
GACAT3-202ENST00000442387 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
GACAT3-202ENST00000442387 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
GACAT3-202ENST00000442387 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
GACAT3-202ENST00000442387 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
GACAT3-202ENST00000442387 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
GACAT3-202ENST00000442387 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
GACAT3-202ENST00000442387 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
GACAT3-202ENST00000442387 CHMP4BQ9H444 224 aaKnown RBP13.17□□□□□ -0.3
GACAT3-202ENST00000442387 STARD7Q9NQZ5 370 aa13.17□□□□□ -0.3
GACAT3-202ENST00000442387 TMEM39AQ9NV64 488 aa13.17□□□□□ -0.3
GACAT3-202ENST00000442387 SYNGAP1Q96PV0 1343 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 TMEM265A0A087WTH1 108 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 EPHB4P54760 987 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 FPGSQ05932 587 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 TOX2Q96NM4 488 aa13.16□□□□□ -0.3
GACAT3-202ENST00000442387 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms