RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ADAMTS4O75173 837 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 FLOT1O75955 427 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 POLR3DP05423 398 aaPredicted RBP12.15□□□□□ -0.46
SYN3-204ENST00000441821 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
SYN3-204ENST00000441821 PBX2P40425 430 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 ACLYP53396 1101 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 PPIGQ13427 754 aaKnown RBP eCLIP12.15□□□□□ -0.462e-7■■■■□ 19.9
SYN3-204ENST00000441821 POLA2Q14181 598 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 ZNF792Q3KQV3 632 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 TMEM240Q5SV17 173 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 MFSD5Q6N075 450 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 TMEM179Q6ZVK1 233 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 ATG4CQ96DT6 458 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 MMP19Q99542 508 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 DBNLQ9UJU6 430 aaKnown RBP12.15□□□□□ -0.46
SYN3-204ENST00000441821 TBX21Q9UL17 535 aa12.15□□□□□ -0.46
SYN3-204ENST00000441821 SMCHD1A6NHR9 2005 aa12.15□□□□□ -0.47
SYN3-204ENST00000441821 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
SYN3-204ENST00000441821 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
SYN3-204ENST00000441821 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
SYN3-204ENST00000441821 OS9Q13438 667 aaPredicted RBP12.14□□□□□ -0.47
SYN3-204ENST00000441821 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
SYN3-204ENST00000441821 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
SYN3-204ENST00000441821 KLHDC9Q8NEP7 349 aa12.14□□□□□ -0.47
SYN3-204ENST00000441821 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
SYN3-204ENST00000441821 ADAMTS5Q9UNA0 930 aa12.14□□□□□ -0.47
SYN3-204ENST00000441821 MROH7Q68CQ1 1323 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 GRXCR1A8MXD5 290 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
SYN3-204ENST00000441821 PGK2P07205 417 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 KCTD2Q14681 263 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 CCSAPQ6IQ19 270 aaPredicted RBP12.13□□□□□ -0.47
SYN3-204ENST00000441821 RIOX2Q8IUF8 465 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 SSH3Q8TE77 659 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 ANTXR1Q9H6X2 564 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 VCPKMTQ9H867 229 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
SYN3-204ENST00000441821 CNPY2Q9Y2B0 182 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 TMX2Q9Y320 296 aa12.13□□□□□ -0.47
SYN3-204ENST00000441821 ELP1O95163 1332 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 SYNRGQ9UMZ2 1314 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 PLXNA1Q9UIW2 1896 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 MAGEB6P1A0A0J9YX57 407 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 TRIM27P14373 513 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 CDK7P50613 346 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 RAB30Q15771 203 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 CCDC85BQ15834 202 aaPredicted RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 KCNA10Q16322 511 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 PSRC1Q6PGN9 363 aaPredicted RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 LENG1Q96BZ8 264 aaPredicted RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 GLT1D1Q96MS3 346 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
SYN3-204ENST00000441821 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 SWAP70Q9UH65 585 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 MSRAQ9UJ68 235 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
SYN3-204ENST00000441821 DUSP11O75319 330 aaKnown RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 CSF2RAP15509 400 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 IGFBP4P22692 258 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 COPB2P35606 906 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 STAT3P40763 770 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 EVX2Q03828 476 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 ZNF365Q70YC5 407 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 CXXC1Q9P0U4 656 aaPredicted RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
SYN3-204ENST00000441821 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
SYN3-204ENST00000441821 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 COL11A1P12107 1806 aaPredicted RBP12.1□□□□□ -0.47
SYN3-204ENST00000441821 ARVCFO00192 962 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 VWA5AO00534 786 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 ACRP10323 421 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 BMP1P13497 986 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
SYN3-204ENST00000441821 ICA1Q05084 483 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
SYN3-204ENST00000441821 MAMDC4Q6UXC1 1216 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
SYN3-204ENST00000441821 HERVK_113Q902F9 699 aa12.1□□□□□ -0.47
SYN3-204ENST00000441821 SLC28A3Q9HAS3 691 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms