RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 AIFM3Q96NN9 605 aa13.42□□□□□ -0.26
LTBR-203ENST00000441074 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
LTBR-203ENST00000441074 ANGEL1Q9UNK9 670 aaKnown RBP13.42□□□□□ -0.26
LTBR-203ENST00000441074 ERLIN2O94905 339 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 NFIXQ14938 502 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 E2F4Q16254 413 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 CPLX3Q8WVH0 158 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 ZC3H4Q9UPT8 1303 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 GPAA1O43292 621 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 KLRK1P26718 216 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 ARHGAP25P42331 645 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 PSEN1P49768 467 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 PUM3Q15397 648 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 CTAGE1Q96RT6 745 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 PDGFDQ9GZP0 370 aaPredicted RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 PUS7LQ9H0K6 701 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 PIH1D3Q9NQM4 214 aaKnown RBP13.41□□□□□ -0.26
LTBR-203ENST00000441074 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
LTBR-203ENST00000441074 IDH1O75874 414 aaKnown RBP13.4□□□□□ -0.26
LTBR-203ENST00000441074 FGFR2P21802 821 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 CASP14P31944 242 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 METAP2P50579 478 aaKnown RBP eCLIP13.4□□□□□ -0.26
LTBR-203ENST00000441074 STIM1Q13586 685 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 GPATCH11Q8N954 259 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 ACRBPQ8NEB7 543 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 COG1Q8WTW3 980 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 ITIH6Q6UXX5 1313 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
LTBR-203ENST00000441074 SEMA3EO15041 775 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 POLR2DO15514 142 aaKnown RBP13.4□□□□□ -0.26
LTBR-203ENST00000441074 GYG1P46976 350 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 COL23A1Q86Y22 540 aaPredicted RBP13.4□□□□□ -0.26
LTBR-203ENST00000441074 STK11IPQ8N1F8 1099 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 LPIN2Q92539 896 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
LTBR-203ENST00000441074 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 EBAG9O00559 213 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
LTBR-203ENST00000441074 ABL1P00519 1130 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 PTPREP23469 700 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 USP8P40818 1118 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
LTBR-203ENST00000441074 TRIM29Q14134 588 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
LTBR-203ENST00000441074 SPECC1Q5M775 1068 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 KAT2BQ92831 832 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
LTBR-203ENST00000441074 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 GYPCP04921 128 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 TRAPPC11Q7Z392 1133 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 FAM76AQ8TAV0 307 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 FAM169AQ9Y6X4 670 aa13.39□□□□□ -0.27
LTBR-203ENST00000441074 HNRNPH1P31943 449 aaKnown RBP13.38□□□□□ -0.27
LTBR-203ENST00000441074 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
LTBR-203ENST00000441074 IRAK1P51617 712 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 CYP26C1Q6V0L0 522 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
LTBR-203ENST00000441074 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 CXorf56Q9H5V9 222 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 FBXO2Q9UK22 296 aaPredicted RBP13.38□□□□□ -0.27
LTBR-203ENST00000441074 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 JAG2Q9Y219 1238 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 ANKRD36CQ5JPF3 1778 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 ACTN4O43707 911 aaKnown RBP13.38□□□□□ -0.27
LTBR-203ENST00000441074 GYS1P13807 737 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 ADD2P35612 726 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 GGCXP38435 758 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 CCT5P48643 541 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 LIG3P49916 1009 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 ERVK-24P63145 666 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 SECISBP2LQ93073 1101 aaKnown RBP13.38□□□□□ -0.27
LTBR-203ENST00000441074 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 CRACR2AQ9BSW2 395 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 KAT14Q9H8E8 782 aa13.38□□□□□ -0.27
LTBR-203ENST00000441074 PPFIA1Q13136 1202 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 CUL4BQ13620 913 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
LTBR-203ENST00000441074 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 WASF1Q92558 559 aa13.37□□□□□ -0.27
LTBR-203ENST00000441074 ECM29Q5VYK3 1845 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms