RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 SPZ1Q9BXG8 430 aa22.04■■□□□ 1.12
SNX17-203ENST00000440760 ISY1Q9ULR0 285 aaKnown RBP22.04■■□□□ 1.12
SNX17-203ENST00000440760 POLR2AP24928 1970 aaKnown RBP22.03■■□□□ 1.12
SNX17-203ENST00000440760 KCTD1Q719H9 257 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 PHF20Q9BVI0 1012 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 VAT1LQ9HCJ6 419 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 RBM27Q9P2N5 1060 aaKnown RBP22.03■■□□□ 1.12
SNX17-203ENST00000440760 U2AF2P26368 475 aaKnown RBP eCLIP22.03■■□□□ 1.124e-7■■■■■ 30.7
SNX17-203ENST00000440760 ZNF543Q08ER8 600 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 ASPRV1Q53RT3 343 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 PPP4R3BQ5MIZ7 849 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 NBPF12Q5TAG4 269 aaPredicted RBP22.03■■□□□ 1.12
SNX17-203ENST00000440760 TTBK2Q6IQ55 1244 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 CCDC84Q86UT8 332 aaPredicted RBP22.03■■□□□ 1.12
SNX17-203ENST00000440760 LZTS2Q9BRK4 669 aa22.03■■□□□ 1.12
SNX17-203ENST00000440760 A0A1W2PRG0 241 aa22.02■■□□□ 1.12
SNX17-203ENST00000440760 XBP1P17861 261 aa22.02■■□□□ 1.12
SNX17-203ENST00000440760 SAFBQ15424 915 aaKnown RBP eCLIP22.02■■□□□ 1.12
SNX17-203ENST00000440760 MKL1Q969V6 931 aa22.02■■□□□ 1.12
SNX17-203ENST00000440760 ZNF396Q96N95 335 aaPredicted RBP22.02■■□□□ 1.12
SNX17-203ENST00000440760 SCAND2PQ9GZW5 306 aaPredicted RBP22.02■■□□□ 1.12
SNX17-203ENST00000440760 ADAMTS3O15072 1205 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 ECE1P42892 770 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 CSPP1Q1MSJ5 1256 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 WWC2Q6AWC2 1192 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 TYW1BQ6NUM6 668 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 CAVIN1Q6NZI2 390 aaKnown RBP22.01■■□□□ 1.11
SNX17-203ENST00000440760 CLIC4Q9Y696 253 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 LMOD1P29536 600 aaPredicted RBP22.01■■□□□ 1.11
SNX17-203ENST00000440760 SLC16A2P36021 539 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 CAP2P40123 477 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 NPY5RQ15761 445 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 SLFN13Q68D06 897 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 HEATR3Q7Z4Q2 680 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 APOBEC3FQ8IUX4 373 aaKnown RBP22.01■■□□□ 1.11
SNX17-203ENST00000440760 NOSTRINQ8IVI9 506 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 ACER1Q8TDN7 264 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 PIGSQ96S52 555 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 NUP88Q99567 741 aaPredicted RBP22.01■■□□□ 1.11
SNX17-203ENST00000440760 CFAP45Q9UL16 551 aa22.01■■□□□ 1.11
SNX17-203ENST00000440760 ELP1O95163 1332 aa22■■□□□ 1.11
SNX17-203ENST00000440760 UBE2HP62256 183 aa22■■□□□ 1.11
SNX17-203ENST00000440760 MAP3K10Q02779 954 aa22■■□□□ 1.11
SNX17-203ENST00000440760 FZD1Q9UP38 647 aa22■■□□□ 1.11
SNX17-203ENST00000440760 FAM205CA6NFA0 338 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 PHF20L1A8MW92 1017 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 F5H6K3 240 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 MBD3O95983 291 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 NDUFB10O96000 172 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 KRT2P35908 639 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 SLC1A4P43007 532 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 KLRC3Q07444 240 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 NOM1Q5C9Z4 860 aaKnown RBP21.99■■□□□ 1.11
SNX17-203ENST00000440760 RRP36Q96EU6 259 aaKnown RBP21.99■■□□□ 1.11
SNX17-203ENST00000440760 FOXP1Q9H334 677 aaPredicted RBP21.99■■□□□ 1.11
SNX17-203ENST00000440760 RIOX1Q9H6W3 641 aa21.99■■□□□ 1.11
SNX17-203ENST00000440760 NLRP5P59047 1200 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 EARS2Q5JPH6 523 aaKnown RBP21.98■■□□□ 1.11
SNX17-203ENST00000440760 SPICE1Q8N0Z3 855 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 PGBD1Q96JS3 809 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 GLIS2Q9BZE0 524 aaPredicted RBP21.98■■□□□ 1.11
SNX17-203ENST00000440760 SSC5DA1L4H1 1573 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 STXBP3O00186 592 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 GPATCH4Q5T3I0 446 aaKnown RBP21.98■■□□□ 1.11
SNX17-203ENST00000440760 DLK2Q6UY11 383 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 ADGRF4Q8IZF3 695 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 GMCL1P1Q8NEA9 526 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 DCAF4Q8WV16 495 aa21.98■■□□□ 1.11
SNX17-203ENST00000440760 ADARB2Q9NS39 739 aaKnown RBP21.98■■□□□ 1.11
SNX17-203ENST00000440760 SEC63Q9UGP8 760 aaKnown RBP21.98■■□□□ 1.11
SNX17-203ENST00000440760 DOCK1Q14185 1865 aa21.97■■□□□ 1.11
SNX17-203ENST00000440760 ZYXQ15942 572 aaKnown RBP21.97■■□□□ 1.11
SNX17-203ENST00000440760 KIAA1755Q5JYT7 1200 aa21.97■■□□□ 1.11
SNX17-203ENST00000440760 ATL3Q6DD88 541 aa21.97■■□□□ 1.11
SNX17-203ENST00000440760 ARHGEF10LQ9HCE6 1279 aa21.97■■□□□ 1.11
SNX17-203ENST00000440760 RTEL1Q9NZ71 1219 aa21.97■■□□□ 1.11
SNX17-203ENST00000440760 TMEM63CQ9P1W3 806 aa21.97■■□□□ 1.11
SNX17-203ENST00000440760 JMJD4Q9H9V9 463 aa21.96■■□□□ 1.11
SNX17-203ENST00000440760 BARHL2Q9NY43 387 aa21.96■■□□□ 1.11
SNX17-203ENST00000440760 RCOR1Q9UKL0 485 aa21.96■■□□□ 1.11
SNX17-203ENST00000440760 SMARCA1P28370 1054 aa21.96■■□□□ 1.11
SNX17-203ENST00000440760 ANO1Q5XXA6 986 aa21.96■■□□□ 1.11
SNX17-203ENST00000440760 POLR3EQ9NVU0 708 aa21.96■■□□□ 1.11
SNX17-203ENST00000440760 USP17L10C9JJH3 530 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 INPP5BP32019 993 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 TOB1P50616 345 aaPredicted RBP21.95■■□□□ 1.1
SNX17-203ENST00000440760 STK38Q15208 465 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 LINC00301Q8NCQ3 95 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 RASGRP4Q8TDF6 673 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 TNFRSF25Q93038 417 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 BRMS1Q9HCU9 246 aa21.95■■□□□ 1.1
SNX17-203ENST00000440760 ASNSP08243 561 aa21.94■■□□□ 1.1
SNX17-203ENST00000440760 NASPP49321 788 aaPredicted RBP21.94■■□□□ 1.1
SNX17-203ENST00000440760 NAPAP54920 295 aa21.94■■□□□ 1.1
SNX17-203ENST00000440760 SF3A1Q15459 793 aaKnown RBP21.94■■□□□ 1.1
SNX17-203ENST00000440760 GMCL1Q96IK5 515 aa21.94■■□□□ 1.1
SNX17-203ENST00000440760 SH3GLB2Q9NR46 395 aa21.94■■□□□ 1.1
SNX17-203ENST00000440760 TMX2Q9Y320 296 aa21.94■■□□□ 1.1
SNX17-203ENST00000440760 ATP2B1P20020 1258 aa21.94■■□□□ 1.1
SNX17-203ENST00000440760 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms