RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
GTF3C5-206ENST00000439697 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
GTF3C5-206ENST00000439697 MINDY4BA8MYZ0 360 aa13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 MAP3K21Q5TCX8 1036 aa13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 CHD1LQ86WJ1 897 aa13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
GTF3C5-206ENST00000439697 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 WDR46O15213 610 aaKnown RBP13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 IGHA2P01877 340 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 DSG3P32926 999 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 TDO2P48775 406 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 CCNA1P78396 465 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 PLEKHH3Q7Z736 793 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 NACAP1Q9BZK3 213 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 ADAMTS5Q9UNA0 930 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 PLIN4Q96Q06 1357 aa13.69□□□□□ -0.22
GTF3C5-206ENST00000439697 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 APPP05067 770 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 HOXC6P09630 235 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 COL6A1P12109 1028 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 CCND3P30281 292 aaPredicted RBP13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 GRB14Q14449 540 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 CCDC129Q6ZRS4 1044 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 SPICE1Q8N0Z3 855 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 MKL1Q969V6 931 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 MKNK2Q9HBH9 465 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 NYAP2Q9P242 653 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 PARP14Q460N5 1801 aa13.68□□□□□ -0.22
GTF3C5-206ENST00000439697 PTPREP23469 700 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 RGS2P41220 211 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 PPARAQ07869 468 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 ALX1Q15699 326 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 CCL14Q16627 93 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 TRMT44Q8IYL2 757 aaKnown RBP13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 SHCBP1Q8NEM2 672 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 MOV10L1Q9BXT6 1211 aaKnown RBP13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 SPATC1LQ9H0A9 340 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 NAPBQ9H115 298 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 ZNF287Q9HBT7 754 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 SYNPO2Q9UMS6 1093 aa13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
GTF3C5-206ENST00000439697 A0A0D9SFI3 127 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 SLC15A5A6NIM6 579 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 PRDM1O75626 825 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 FLOT1O75955 427 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 FGRP09769 529 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 MAP2K5Q13163 448 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 LHX8Q68G74 356 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 STK11IPQ8N1F8 1099 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 NEDD1Q8NHV4 660 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 ATG4CQ96DT6 458 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 CEP95Q96GE4 821 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 CDX2Q99626 313 aaPredicted RBP13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 APBA2Q99767 749 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
GTF3C5-206ENST00000439697 ZNF236Q9UL36 1845 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 F5H6K3 240 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ZKSCAN1P17029 563 aaPredicted RBP13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ATP2B2Q01814 1243 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 PDE4BQ07343 736 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 KLRC3Q07444 240 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 TMEM132BQ14DG7 1078 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ZNF697Q5TEC3 545 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 FAM109BQ6ICB4 259 aaPredicted RBP13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ZNF589Q86UQ0 364 aaPredicted RBP13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ZNF444Q8N0Y2 327 aaPredicted RBP13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 REPS2Q8NFH8 660 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 PPP1R9AQ9ULJ8 1098 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 TACC3Q9Y6A5 838 aa13.65□□□□□ -0.22
GTF3C5-206ENST00000439697 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 DNAH12Q6ZR08 3092 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 STRNO43815 780 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 NDUFB10O96000 172 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 ERCC3P19447 782 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 NOVP48745 357 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 FAM83BQ5T0W9 1011 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 FLRT1Q9NZU1 646 aa13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
GTF3C5-206ENST00000439697 VWA5AO00534 786 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms