RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 FAM169AQ9Y6X4 670 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 TNKSO95271 1327 aa10.15□□□□□ -0.79
COPB1-202ENST00000439561 A0A087WUV0 522 aaPredicted RBP10.14□□□□□ -0.79
COPB1-202ENST00000439561 FOXP2O15409 715 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 ARID5AQ03989 594 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 PDCLQ13371 301 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 TRIM14Q14142 442 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 CACNA2D4Q7Z3S7 1137 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 GIMAP7Q8NHV1 300 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 SMARCAL1Q9NZC9 954 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 RAB21Q9UL25 225 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 GOLGA6L10A6NI86 522 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 OPA1O60313 960 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 UQCRFS1P1P0C7P4 283 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 CORO7P57737 925 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
COPB1-202ENST00000439561 TCP11X2Q5H9J9 407 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 TMTC2Q8N394 836 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 COG1Q8WTW3 980 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 MED15Q96RN5 788 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 STRBPQ96SI9 672 aaKnown RBP10.14□□□□□ -0.79
COPB1-202ENST00000439561 FAM207AQ9NSI2 230 aaPredicted RBP10.14□□□□□ -0.79
COPB1-202ENST00000439561 HPCAL4Q9UM19 191 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 A0A087X0B3 334 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 CCDC194A0A1B0GVG4 234 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 RNF225M0QZC1 329 aaPredicted RBP10.14□□□□□ -0.79
COPB1-202ENST00000439561 MARCH6O60337 910 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 ATF3P18847 181 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 NTRK3Q16288 839 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 PTPROQ16827 1216 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 CCDC91Q7Z6B0 441 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 CEP57Q86XR8 500 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 LCORLQ8N3X6 602 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 SPATA5Q8NB90 893 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 ALS2CR12Q96Q35 445 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 MYCBPQ99417 103 aaPredicted RBP10.14□□□□□ -0.79
COPB1-202ENST00000439561 UBXN6Q9BZV1 441 aa10.14□□□□□ -0.79
COPB1-202ENST00000439561 PLEKHG2Q9H7P9 1386 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 CYP2D7A0A087X1C5 515 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 FAM170AA1A519 330 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 PLEKHA8P1O95397 391 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 RPN1P04843 607 aaKnown RBP10.13□□□□□ -0.79
COPB1-202ENST00000439561 NOP2P46087 812 aaKnown RBP10.13□□□□□ -0.79
COPB1-202ENST00000439561 CASP7P55210 303 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 ASIC1P78348 528 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 C8orf74Q6P047 294 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 FERMT2Q96AC1 680 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.13□□□□□ -0.79
COPB1-202ENST00000439561 NOC4LQ9BVI4 516 aaKnown RBP10.13□□□□□ -0.79
COPB1-202ENST00000439561 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 MYO1AQ9UBC5 1043 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 DUSP10Q9Y6W6 482 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 LIFRP42702 1097 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 USP5P45974 858 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 C2CD5Q86YS7 1000 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 RASGRP4Q8TDF6 673 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
COPB1-202ENST00000439561 TMOD3Q9NYL9 352 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 LRWD1Q9UFC0 647 aa10.13□□□□□ -0.79
COPB1-202ENST00000439561 RGPD1P0DJD0 1748 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 BUB1O43683 1085 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 BMP15O95972 392 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 MAP2K2P36507 400 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 SH2D3CQ8N5H7 860 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
COPB1-202ENST00000439561 IFIH1Q9BYX4 1025 aaKnown RBP10.12□□□□□ -0.79
COPB1-202ENST00000439561 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 PRCPP42785 496 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 VAV2P52735 878 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 DPYDQ12882 1025 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 PPFIA1Q13136 1202 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 EXOC1Q9NV70 894 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 AATFQ9NY61 560 aaKnown RBP eCLIP10.12□□□□□ -0.79
COPB1-202ENST00000439561 RICTORQ6R327 1708 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 PPP1R3GB7ZBB8 358 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 MOCS3O95396 460 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 SARSP49591 514 aaKnown RBP10.12□□□□□ -0.79
COPB1-202ENST00000439561 EZH2Q15910 746 aaKnown RBP10.12□□□□□ -0.79
COPB1-202ENST00000439561 EARS2Q5JPH6 523 aaKnown RBP10.12□□□□□ -0.79
COPB1-202ENST00000439561 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 EHD2Q9NZN4 543 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 SLIT1O75093 1534 aa10.12□□□□□ -0.79
COPB1-202ENST00000439561 NRXN3Q9Y4C0 1643 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 GOLGA6L7A0A1B0GV03 622 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 ESYT3A0FGR9 886 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 BCAMP50895 628 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 IRAK1P51617 712 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
COPB1-202ENST00000439561 FAM47AQ5JRC9 791 aa10.11□□□□□ -0.79
COPB1-202ENST00000439561 GBP6Q6ZN66 633 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms