RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 COPB2P35606 906 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 HAND2P61296 217 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 CCDC178Q5BJE1 867 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 KIAA1755Q5JYT7 1200 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 SLFN13Q68D06 897 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
MCF2L-216ENST00000439475 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 ESR2Q92731 530 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 ATG4CQ96DT6 458 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 CCDC136Q96JN2 1154 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 SPATC1LQ9H0A9 340 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 RNF208Q9H0X6 261 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 PORCNQ9H237 461 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 MROH8Q9H579 483 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 SLC5A4Q9NY91 659 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 PPP1R9AQ9ULJ8 1098 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
MCF2L-216ENST00000439475 PLIN4Q96Q06 1357 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
MCF2L-216ENST00000439475 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 PEX10O60683 326 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 ZBED4O75132 1171 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
MCF2L-216ENST00000439475 BMP3P12645 472 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 PTPREP23469 700 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 MAP2K5Q13163 448 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 NCAPG2Q86XI2 1143 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 TTC14Q96N46 770 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 INCENPQ9NQS7 918 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 TCP11L1Q9NUJ3 509 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 FEM1BQ9UK73 627 aa12.36□□□□□ -0.43
MCF2L-216ENST00000439475 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-216ENST00000439475 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 HMGCRP04035 888 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 INHAP05111 366 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 GJB1P08034 283 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 CCL5P13501 91 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 ELNP15502 786 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 CHMLP26374 656 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 SLC1A4P43007 532 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 MTFR1Q15390 333 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 DPP9Q86TI2 863 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 FAM160B2Q86V87 743 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 IQCA1Q86XH1 822 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
MCF2L-216ENST00000439475 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
MCF2L-216ENST00000439475 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-216ENST00000439475 ADAMTS5Q9UNA0 930 aa12.35□□□□□ -0.43
MCF2L-216ENST00000439475 VWA5AO00534 786 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
MCF2L-216ENST00000439475 ZKSCAN1P17029 563 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-216ENST00000439475 ERCC3P19447 782 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 EN2P19622 333 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-216ENST00000439475 STAT3P40763 770 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 TRDNQ13061 729 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-216ENST00000439475 MORN1Q5T089 497 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 RIOX2Q8IUF8 465 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 KRT23Q9C075 422 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 IL17RBQ9NRM6 502 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 FBXO28Q9NVF7 368 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 RPTORQ8N122 1335 aa12.34□□□□□ -0.43
MCF2L-216ENST00000439475 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 FCER1AP12319 257 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 MCCP23508 829 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 GJA8P48165 433 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 STAT2P52630 851 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 GRB14Q14449 540 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 MFSD14CQ5VZR4 134 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 RCSD1Q6JBY9 416 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 ABRAQ8N0Z2 381 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 USP6NLQ92738 828 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 GMCL1Q96IK5 515 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 NUP88Q99567 741 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-216ENST00000439475 APBA2Q99767 749 aa12.33□□□□□ -0.44
MCF2L-216ENST00000439475 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-216ENST00000439475 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
MCF2L-216ENST00000439475 PLA2G6O60733 806 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 SGPL1O95470 568 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 TFRCP02786 760 aaKnown RBP12.32□□□□□ -0.44
MCF2L-216ENST00000439475 HOXC6P09630 235 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 NOVP48745 357 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 OAZ1P54368 228 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 KCTD2Q14681 263 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 CASC1Q6TDU7 716 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 DGKHQ86XP1 1220 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
MCF2L-216ENST00000439475 MMP19Q99542 508 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms