RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 KRT9P35527 623 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 KRT2P35908 639 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 C2orf54Q08AI8 447 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 EARS2Q5JPH6 523 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 SND1Q7KZF4 910 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 ZNF526Q8TF50 670 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 ZSCAN10Q96SZ4 725 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 CHP1Q99653 195 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 FMNL1O95466 1100 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 EIF5P55010 431 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 TFAP4Q01664 338 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 PTGDRQ13258 359 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 RILPL1Q5EBL4 403 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 INTS5Q6P9B9 1019 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 ENAHQ8N8S7 591 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 AFAP1L1Q8TED9 768 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 SYMPKQ92797 1274 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 KAT14Q9H8E8 782 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 HPDP32754 393 aaPredicted RBP11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 TBC1D9BQ66K14 1250 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 ZNF444Q8N0Y2 327 aaPredicted RBP11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 SH2D3CQ8N5H7 860 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 CCDC148Q8NFR7 591 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 BCAS4Q8TDM0 211 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 IFT81Q8WYA0 676 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 ANKZF1Q9H8Y5 726 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 COL5A2P05997 1499 aaPredicted RBP11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 IFNAR1P17181 557 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 TOB1P50616 345 aaPredicted RBP11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 UBXN1Q04323 297 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 CCDC122Q5T0U0 273 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 TXNRD3Q86VQ6 643 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 CRNKL1Q9BZJ0 848 aaKnown RBP11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 CEP131Q9UPN4 1083 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 CCDC194A0A1B0GVG4 234 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 RASGRP2Q7LDG7 609 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 JPH2Q9BR39 696 aaPredicted RBP11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 MINPP1Q9UNW1 487 aa11.17□□□□□ -0.62
CDC42SE1-202ENST00000439374 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 TCRBV5S4A2TA0A5A2 114 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 ESYT3A0FGR9 886 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 GNAT2P19087 354 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 GGCXP38435 758 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 MECOMQ03112 1051 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 ARID5AQ03989 594 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 NTRK3Q16288 839 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 NAPGQ99747 312 aaPredicted RBP11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 CDC23Q9UJX2 597 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 IPO7O95373 1038 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 RFC4P35249 363 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 PARP10Q53GL7 1025 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 TTC38Q5R3I4 469 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 LRRC31Q6UY01 552 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 EXOC4Q96A65 974 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 PLA2G12BQ9BX93 195 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 ZHX3Q9H4I2 956 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 CAPN7Q9Y6W3 813 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 SLIT3O75094 1523 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
CDC42SE1-202ENST00000439374 TRIM49BA6NDI0 452 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 CAMTA2O94983 1202 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 GUCY2FP51841 1108 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 PDCLQ13371 301 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 PTPAQ15257 358 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 DUSP10Q9Y6W6 482 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 CCDC151A5D8V7 595 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 ERVV-1B6SEH8 477 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 WNT7AO00755 349 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 GNGT1P63211 74 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 ACTN3Q08043 901 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 RESP18Q5W5W9 173 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 CDHR2Q9BYE9 1310 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 SYNRGQ9UMZ2 1314 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms