RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
PCNX3-202ENST00000439247 IFNAR1P17181 557 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 USP14P54578 494 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 SGMS1Q86VZ5 419 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 PES1O00541 588 aaKnown RBP15.28■□□□□ 0.04
PCNX3-202ENST00000439247 PPFIA4O75335 1185 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 TRIM37O94972 964 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 PDE6AP16499 860 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 CCT5P48643 541 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 LIG3P49916 1009 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 ZNF174Q15697 407 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 RTN1Q16799 776 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 TMTC1Q8IUR5 882 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 ELOA2Q8IYF1 753 aaPredicted RBP15.28■□□□□ 0.04
PCNX3-202ENST00000439247 HELBQ8NG08 1087 aaPredicted RBP15.28■□□□□ 0.04
PCNX3-202ENST00000439247 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.044e-6■■■■□ 20.8
PCNX3-202ENST00000439247 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 PHKA1P46020 1223 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 RRAGBQ5VZM2 374 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 GPIHBP1Q8IV16 184 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
PCNX3-202ENST00000439247 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 MED4Q9NPJ6 270 aa15.28■□□□□ 0.04
PCNX3-202ENST00000439247 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 AGPSO00116 658 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.04
PCNX3-202ENST00000439247 DNAJC21Q5F1R6 531 aaKnown RBP15.27■□□□□ 0.04
PCNX3-202ENST00000439247 WDR93Q6P2C0 686 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 KAT2BQ92831 832 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 AIDAQ96BJ3 306 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 DUSP10Q9Y6W6 482 aa15.27■□□□□ 0.04
PCNX3-202ENST00000439247 CYP26C1Q6V0L0 522 aa15.27■□□□□ 0.03
PCNX3-202ENST00000439247 TRAPPC11Q7Z392 1133 aa15.27■□□□□ 0.03
PCNX3-202ENST00000439247 PPM1EQ8WY54 764 aa15.27■□□□□ 0.03
PCNX3-202ENST00000439247 STRBPQ96SI9 672 aaKnown RBP15.27■□□□□ 0.03
PCNX3-202ENST00000439247 FOXP1Q9H334 677 aaPredicted RBP15.27■□□□□ 0.03
PCNX3-202ENST00000439247 EPN1Q9Y6I3 576 aaPredicted RBP15.27■□□□□ 0.03
PCNX3-202ENST00000439247 TRIM49BA6NDI0 452 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 NDUFA10O95299 355 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 STIM1Q13586 685 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 TRIM22Q8IYM9 498 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 CRACR2BQ8N4Y2 399 aaPredicted RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 SPEF2Q9C093 1822 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 RCCD1A6NED2 376 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 MBD4O95243 580 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 GPTP24298 496 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 HERVK_113P62684 666 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 UBXN1Q04323 297 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 C2orf54Q08AI8 447 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 KANK3Q6NY19 840 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 IFNL3Q8IZI9 196 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 MSL3Q8N5Y2 521 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 NAPBQ9H115 298 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 XDHP47989 1333 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 TTC26A0AVF1 554 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
PCNX3-202ENST00000439247 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 SH3RF1Q7Z6J0 888 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 GPATCH11Q8N954 259 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 CTAGE1Q96RT6 745 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 MTRQ99707 1265 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
PCNX3-202ENST00000439247 MYH7P12883 1935 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 GUCY2CP25092 1073 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
PCNX3-202ENST00000439247 PPARAQ07869 468 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
PCNX3-202ENST00000439247 COG1Q8WTW3 980 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 HDAC7Q8WUI4 952 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
PCNX3-202ENST00000439247 GREM2Q9H772 168 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 FECHP22830 423 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 AARSP49588 968 aaKnown RBP eCLIP15.25■□□□□ 0.034e-6■■□□□ 13.1
PCNX3-202ENST00000439247 CCDC122Q5T0U0 273 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 FBXW10Q5XX13 1052 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 KIF6Q6ZMV9 814 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 TADA2BQ86TJ2 420 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 SELENOOQ9BVL4 669 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 LACRTQ9GZZ8 138 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 ACBD3Q9H3P7 528 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 AKAP11Q9UKA4 1901 aa15.25■□□□□ 0.03
PCNX3-202ENST00000439247 MAP3K15Q6ZN16 1313 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 STK36Q9NRP7 1315 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 KCNJ18B7U540 433 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms